1991-09--1996-07 Ph.D. in Biochemistry: China Agricultural University
1987-09--1991-07 B.Sc. in Food Engineering: Tianjin University of Commerce
2019-08~Present - Institute of Microbiology, Chinese Academy of Sciences - Researcher, Doctoral Supervisor
2014-07~2019-07 - Key Laboratory of Genomic Information and Science, Chinese Academy of Sciences - Director
2013-07~2014-07 - Key Laboratory of Genomic Information and Science, Chinese Academy of Sciences - Deputy Director
2003-11~2019-07 - Beijing Institute of Genomics, Chinese Academy of Sciences - Researcher, Doctoral Supervisor
2002-02~2008-09 - Watson Institute of Genome Sciences, Zhejiang University - Professor, Master's Supervisor
1999-08~2003-11 - Human Genome Center, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences - Chief Engineer
1998-08~1999-07 - Genome Center, University of Washington, Seattle, USA - Visiting Scholar
1996-09~1998-07 - Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences - Assistant Researcher
Hebei Province Science and Technology Progress Third Prize (2015): Provincial Level
Tangshan City Science and Technology Progress Second Prize (2015): City Level
State Council Special Allowance (2014): National Level
Zhu Li Yuehua Excellent Teacher Award, Chinese Academy of Sciences (2008): Institute Level
First Prize in Zhejiang Province Science and Technology for Large-Scale Cloning of Functional Genes in Silkworm Using EST Information Resources (2007): Provincial Level
Excellent Teacher Award, Chinese Academy of Sciences (2006): Institute Level
Outstanding Scientific Achievement Collective Award for Hybrid Rice Genome Project, Chinese Academy of Sciences (2003): Institute Level
Qiu Shi Outstanding Scientific Achievement Collective Award for Hybrid Rice Genome Project, Hong Kong Qiu Shi Science and Technology Foundation (2002): Other
Research
Microbial Resource Bioinformatics Mining and Utilization
VarEPS-Influ:an risk evaluation system of occurred and virtual variations of influenza virus genomes, 11th Author, 2023
Insights into the genomic evolution and the alkali tolerance mechanisms of Agaricus sinodeliciosus by comparative genomic and transcriptomic analyses, 3rd Author, 2023
Gut microbiome and mycobiome in inflammatory bowel disease patients with Clostridioides difficile infection, 11th Author, 2023
Plasmer: an Accurate and Sensitive Bacterial Plasmid Prediction Tool Based on Machine Learning of Shared k-mers and Genomic Features, 11th Author, 2023
A food poisoning caused by ST7 Staphylococcal aureus harboring sea gene in Hainan province, China, 18th Author, 2023
Large-scale genomic survey and characterization of mcr genes carried by foodborne Cronobacter isolates, 9th Author, 2023
Comparative genomic analysis of Fusobacterium nucleatum reveals high intra-species diversity and cgmlst marker construction, 5th Author, 2023
Improved pea reference genome and pan-genome highlight genomic features and evolutionary characteristics, 4th Author, 2022
VarEPS: an evaluation and prewarning system of known and virtual variations of SARS-CoV-2 genomes, 11th Author, 2022
Monitoring microbial communities in intensive care units over one year in China, 11th Author, 2022
The Dissemination of NDM-1 in Acinetobacter baumannii Strains, 11th Author, 2022
A genome and gene catalog of glacier microbiomes, 7th Author, 2022
Amplicon-based sequencing and co-occurence network analysis reveals notable differences of microbial community structure in healthy and dandruff scalps, 11th Author, 2022
Improved 93-11 Genome and Time-Course Transcriptome Expand Resources for Rice Genomics, 11th Author, 2022
Central gene transcriptional regulatory networks shaping monocyte development in bone marrow, 11th Author, 2022
Identification of a Putative CodY Regulon in the Gram-Negative Phylum Synergistetes, 11th Author, 2022
Genome of the Giant Panda Roundworm Illuminates Its Host Shift and Parasitic Adaptation, 11th Author, 2021
Association of CYP3A5 Gene Polymorphisms and Amlodipine-Induced Peripheral Edema in Chinese Han Patients with Essential Hypertension, 8th Author, 2021
A Method for Estimating 24-Hour Urinary Sodium Excretion by Casual Urine Specimen in Chinese Hypertensive Patients, 9th Author, 2021
Association of CYP3A5 Gene Polymorphisms and Amlodipine-Induced Peripheral Edema in Chinese Han Patients with Essential Hypertension, 11th Author, 2021
Complete sequences of two new KPC-harbouring plasmids in Klebsiella pneumoniae ST11 strains in China, 11th Author, 2021
A fine-scale map of genome-wide recombination in divergent Escherichia coli population, 0th Author, 2021
5-Hydroxymethylcytosine signatures in circulating cell-free DNA as diagnostic and predictive biomarkers for coronary artery disease, 12th Author, 2020
Expert consensus on microbiome sequencing and analysis, 10th Author, 2020
The genome evolution and domestication of tropical fruit mango, 11th Author, 2020
Gene family expansion of pinewood nematode to detoxify its host defence chemicals, 11th Author, 2020
Identification of a SCN4A mutation in a large Chinese family with atypical normokalemic periodic paralysis using whole-exome sequencing, 2nd Author, 2020
Structural and Functional Annotation of Transposable Elements Revealed a Potential Regulation of Genes Involved in Rubber Biosynthesis by TE-Derived siRNA Interference in Hevea brasiliensis, 6th Author, 2020
Post-transcriptional regulation of several biological processes involved in latex production in Hevea brasiliensis, 12th Author, 2020
A Reference Genome of Bursaphelenchus mucronatus Provides New Resources for Revealing Its Displacement by Pinewood Nematode, 10th Author, 2020
Abundant Taxa and Favorable Pathways in the Microbiome of Soda-Saline Lakes in Inner Mongolia, 10th Author, 2020
Genome Assembly and Pathway Analysis of Edible Mushroom Agrocybe cylindracea, 11th Author, 2020
Semi-rational mutagenesis of an industrial Streptomyces fungicidicus strain for improved enduracidin productivity, 12th Author, 2020
Editome Disease Knowledgebase (EDK): a curated knowledgebase of editome-disease associations in human, 12th Author, 2019
Genome structure and evolution of Antirrhinum majus L, 31st Author, 2019
The HuangZaoSi Maize Genome Provides Insights into Genomic Variation and Improvement History of Maize, 11th Author, 2019
Evolview v3: a webserver for visualization, annotation, and management of phylogenetic trees, 11th Author, 2019
Transcriptomic profiling reveals MEP pathway contributing to ginsenoside biosynthesis in
Area of Focus
Ai | Omics | Precision Medicine | Bioinformatics | Data Analysis | Genomics | Crispr | Machine Learning | Drug Design | Single-Cell Analysis
