Professor | Jinfeng Chen | Asia Growth Partners

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Name	Jinfeng Chen
Contact Information	chenjinfeng@ioz.ac.cn
Language ability	Chinese, English
Province	Beijing

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Name

Jinfeng Chen

Contact Information

chenjinfeng@ioz.ac.cn

Language ability

Chinese, English

Province

Beijing

University/Lab Affiliation and Title	University of Chinese Academy of Sciences
Faculty	Life Sciences
Academic Background & Achievements	2006-09--2012-07 PhD: Institute of Genetics and Developmental Biology, Chinese Academy of Sciences 2004-09--2006-07 Master's: Northwest A&F University 2000-09--2004-07 Bachelor's: Northwest A&F University
Work Experience	2020-10 to present - Institute of Zoology, Chinese Academy of Sciences - Research Group Leader 2019-05 to 2020-09 - Beckman Research Institute, City of Hope National Medical Center - Staff Scientist 2017-06 to 2019-04 - University of California, Riverside - Assistant Project Scientist 2013-01 to 2017-06 - University of California, Riverside - Postdoctoral Researcher 2012-07 to 2013-01 - Institute of Genetics and Developmental Biology, Chinese Academy of Sciences - Postdoctoral Researcher

University/Lab Affiliation and Title

University of Chinese Academy of Sciences

Faculty

Life Sciences

Academic Background & Achievements

2006-09--2012-07 PhD: Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
2004-09--2006-07 Master's: Northwest A&F University
2000-09--2004-07 Bachelor's: Northwest A&F University

Work Experience

2020-10 to present - Institute of Zoology, Chinese Academy of Sciences - Research Group Leader
2019-05 to 2020-09 - Beckman Research Institute, City of Hope National Medical Center - Staff Scientist
2017-06 to 2019-04 - University of California, Riverside - Assistant Project Scientist
2013-01 to 2017-06 - University of California, Riverside - Postdoctoral Researcher
2012-07 to 2013-01 - Institute of Genetics and Developmental Biology, Chinese Academy of Sciences - Postdoctoral Researcher

Areas of Focus	Genomics Crop and Agricultural Pest Genomics
Publications	A graph-based genome and pan-genome variation of the model plant Setaria, He Q, Tang S, Zhi H, Chen J, Zhang J, Liang H, Alam O, Li H, Zhang H, Xing L, Li X, Zhang W, Wang H, Shi J, Du H, Wu H, Wang L, Yang P, Xing L, Yan H, Song Z, Liu J, Wang H, Tian X, Qiao Z, Feng G, Guo R, Zhu W, Ren Y, Hao H, Li M, Zhang A, Guo E, Yan F, Li Q, Liu Y, Tian B, Zhao X, Jia R, Feng B, Zhang J, Wei J, Lai J, Jia G, Purugganan M, Diao X, 2023 Biased mutations and gene losses underlying diploidization of the tetraploid broomcorn millet genome, Sun Y, Liu Y, Shi J, Wang L, Liang C, Yang J, Chen J, Chen M, 2023 A lncRNA finetunes salicylic acid biosynthesis to balance plant immunity and growth, Liu N, Xu Z, Li Q, Cao Y, Yang D, Liu S, Wang X, Mi Y, Liu Y, Ding C, Liu Y, Li Y, Yuan Y, Gao G, Chen J, Qian W, Zhang X, 2022 Serial single-cell genomics reveals convergent subclonal evolution of resistance as patients with early-stage breast cancer progress on endocrine plus CDK4/6 therapy, Griffiths JI, Chen J, Cosgrove PA, O'Dea A, Sharma P, Ma C, Trivedi M, Kalinsky K, Wisinski KB, O'Regan R, Makhoul I, Spring LM, Bardia A, Adler FR, Cohen AL, Chang JT, Khan QJ, Bild AH, 2021 Genomic diversity generated by a transposable element burst in a rice recombinant inbred population, Chen J, Lu L, Robb SMC, Collin M, Okumoto Y, Stajich JE, Wessler SR, 2020 Tracking the origin of two genetic components associated with transposable element bursts in domesticated rice, Chen J, Lu L, Benjamin J, Diaz S, Hancock CN, Stajich JE, Wessler SR, 2019 Assessing genome assembly quality using the LTR Assembly Index (LAI), Ou S, Chen J, Jiang N, 2018 Tracking the genome-wide outcomes of a transposable element burst over decades of amplification, Lu L, Chen J, Robb SMC, Okumoto Y, Stajich JE, Wessler SR, 2017 Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution, Chen J, Huang Q, Gao D, Wang J, Lang Y, Liu T, Li B, Bai Z, Luis Goicoechea J, Liang C, Chen C, Zhang W, Sun S, Liao Y, Zhang X, Yang L, Song C, Wang M, Shi J, Liu G, Liu J, Zhou H, Zhou W, Yu Q, An N, Chen Y, Cai Q, Wang B, Liu B, Min J, Huang Y, Wu H, Li Z, Zhang Y, Yin Y, Song W, Jiang J, Jackson SA, Wing RA, Wang J, Chen M, 2013

Areas of Focus

Genomics
Crop and Agricultural Pest Genomics

Publications

A graph-based genome and pan-genome variation of the model plant Setaria, He Q, Tang S, Zhi H, Chen J, Zhang J, Liang H, Alam O, Li H, Zhang H, Xing L, Li X, Zhang W, Wang H, Shi J, Du H, Wu H, Wang L, Yang P, Xing L, Yan H, Song Z, Liu J, Wang H, Tian X, Qiao Z, Feng G, Guo R, Zhu W, Ren Y, Hao H, Li M, Zhang A, Guo E, Yan F, Li Q, Liu Y, Tian B, Zhao X, Jia R, Feng B, Zhang J, Wei J, Lai J, Jia G, Purugganan M, Diao X, 2023
Biased mutations and gene losses underlying diploidization of the tetraploid broomcorn millet genome, Sun Y, Liu Y, Shi J, Wang L, Liang C, Yang J, Chen J, Chen M, 2023
A lncRNA finetunes salicylic acid biosynthesis to balance plant immunity and growth, Liu N, Xu Z, Li Q, Cao Y, Yang D, Liu S, Wang X, Mi Y, Liu Y, Ding C, Liu Y, Li Y, Yuan Y, Gao G, Chen J, Qian W, Zhang X, 2022
Serial single-cell genomics reveals convergent subclonal evolution of resistance as patients with early-stage breast cancer progress on endocrine plus CDK4/6 therapy, Griffiths JI, Chen J, Cosgrove PA, O'Dea A, Sharma P, Ma C, Trivedi M, Kalinsky K, Wisinski KB, O'Regan R, Makhoul I, Spring LM, Bardia A, Adler FR, Cohen AL, Chang JT, Khan QJ, Bild AH, 2021
Genomic diversity generated by a transposable element burst in a rice recombinant inbred population, Chen J, Lu L, Robb SMC, Collin M, Okumoto Y, Stajich JE, Wessler SR, 2020
Tracking the origin of two genetic components associated with transposable element bursts in domesticated rice, Chen J, Lu L, Benjamin J, Diaz S, Hancock CN, Stajich JE, Wessler SR, 2019
Assessing genome assembly quality using the LTR Assembly Index (LAI), Ou S, Chen J, Jiang N, 2018
Tracking the genome-wide outcomes of a transposable element burst over decades of amplification, Lu L, Chen J, Robb SMC, Okumoto Y, Stajich JE, Wessler SR, 2017
Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution, Chen J, Huang Q, Gao D, Wang J, Lang Y, Liu T, Li B, Bai Z, Luis Goicoechea J, Liang C, Chen C, Zhang W, Sun S, Liao Y, Zhang X, Yang L, Song C, Wang M, Shi J, Liu G, Liu J, Zhou H, Zhou W, Yu Q, An N, Chen Y, Cai Q, Wang B, Liu B, Min J, Huang Y, Wu H, Li Z, Zhang Y, Yin Y, Song W, Jiang J, Jackson SA, Wing RA, Wang J, Chen M, 2013

Genomics Genome Structure Evolution Repetitive Sequences Regulatory Mechanisms Crop Genomics Agricultural Pests Genetic Research Molecular Biology Bioinformatics

Shuai Zhan - University of Chinese Academy of Sciences

Qi Liu - Tongji University

Lu Dongdong - Tongji University

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