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Defeng Li
lidefeng@im.ac.cn
Chinese, English
Beijing
University of Chinese Academy of Sciences
Life Sciences
  • 2001-09 to 2006-06 Ph.D. in Science: Institute of Biophysics, Chinese Academy of Sciences
  • 1997-09 to 2001-07 Bachelor's in Science: Wuhan University
  • 2018-02 to Present - Institute of Microbiology, Chinese Academy of Sciences - Project Researcher
  • 2006-07 to 2018-01 - Institute of Biophysics, Chinese Academy of Sciences - Assistant Researcher/Associate Researcher/Project Researcher
  • Member of the Youth Innovation Promotion Association, Chinese Academy of Sciences (2014)
Microbial degradation of pollutants and adaptation mechanisms
Structural biology
  • Paraflavitalea pollutisoli sp. nov., Pollutibacter soli gen. nov. sp. nov., Polluticoccus soli gen. nov. sp. nov., and Terrimonas pollutisoli sp. nov., four new members of the family Chitinophagaceae from polluted soil., Defeng Li, 2024
  • The ligand binding domain of a type IV pilus chemoreceptor PilJ has a different fold from that of another PilJ-type receptor McpN., Defeng Li, 2024
  • A hydrogel-modified electrochemical biosensor for the rapid detection of ammonia-nitrogen-resistant bacteria, Defeng Li, 2024
  • Attractant and repellent induce opposing changes in the four-helix bundle ligand-binding domain of a bacterial chemoreceptor., Defeng Li, 2023
  • Flagellar brake protein YcgR interacts with motor proteins MotA and FliG to regulate the flagellar rotation speed and direction., Defeng Li, 2023
  • Agromyces chromiiresistens sp. nov., Novosphingobium album sp. nov., Sphingobium arseniciresistens sp. nov., Sphingomonas pollutisoli sp. nov., and Salinibacterium metalliresistens sp. nov.: five new members of Microbacteriaceae and Sphingomonadaceae from polluted soil., Defeng Li, 2023
  • Identification and characterization of a novel hydroxylamine oxidase, DnfA, that catalyzes the oxidation of hydroxylamine to N2, Defeng Li, 2022
  • Crystal structure of the chromosome partition protein MukE homodimer, Defeng Li, 2022
  • Desymmetric hydrolysis of prochiral imide for S-pregabalin synthesis by rationally designed d-hydantoinase, Defeng Li, 2022
  • Structural insights into the substrate specificity of 5-chloro-2-hydroxymuconate tautomerase CnbG, Defeng Li, 2022
  • Mutations in surface-sensing receptor WspA lock the Wsp signal transduction system into a constitutively active state, Defeng Li, 2022
  • The Response Regulator FlmD Regulates Biofilm Formation in Comamonas testosteroni through the Transcriptional Activator SoxR, Defeng Li, 2022
  • Genetic Foundations of Direct Ammonia Oxidation (Dirammox) to N-2 and MocR-Like Transcriptional Regulator DnfR in Alcaligenes faecalis Strain JQ135, Defeng Li, 2022
  • Crystal Structure of the Core Module of the Yeast Paf1 Complex, Defeng Li, 2022
  • Soil microbiomes divergently respond to heavy metals and polycyclic aromatic hydrocarbons in contaminated industrial sites, Defeng Li, 2022
  • PapA, a peptidoglycan-associated protein, interacts with OmpC and maintains cell envelope integrity, Defeng Li, 2021
  • Structural and Biochemical Analysis Reveals a Distinct Catalytic Site of Salicylate 5-Monooxygenase NagGH from Rieske Dioxygenases, Defeng Li, 2021
  • Single-Component and Two-Component para-Nitrophenol Monooxygenases: Structural Basis for Their Catalytic Difference, Defeng Li, 2021
  • Novel Alcaligenes ammonioxydans sp. nov. from wastewater treatment sludge oxidizes ammonia to N-2 with a previously unknown pathway, Defeng Li, 2021
  • Hexachlorobenzene Monooxygenase Substrate Selectivity and Catalysis: Structural and Biochemical Insights, Defeng Li, 2021
  • Biochemical insights into Paf1 complex-induced stimulation of Rad6/Bre1-mediated H2B monoubiquitination, Defeng Li, 2021
  • Characterization of the Methanomicrobial Archaeal RNase Zs for Processing the CCA-Containing tRNA Precursors, Defeng Li, 2020
  • A New State I-plus Observed for the L, D- transpeptidase LdtMt2-ertapenem Adduct, Defeng Li, 2020
  • Structural insights into the mechanism of c-di-GMP-bound YcgR regulating flagellar motility in Escherichia coli, Defeng Li, 2020
  • A newly identified duplex RNA unwinding activity of archaeal RNase J depends on processive exoribonucleolysis coupled steric occlusion by its structural archaeal loops, Defeng Li, 2020
  • Crystal structure of the glycoside hydrolase PssZ from Listeria monocytogenes, Defeng Li, 2019
  • The 1-beta-methyl group confers a lower affinity of L,D-transpeptidase Ldt(Mt2) for ertapenem than for imipenem, Defeng Li, 2019
  • The ligand-binding domain of a chemoreceptor from Comamonas testosteroni has a previously unknown homotrimeric structure, Defeng Li, 2019
  • Huang Z, Wang YH, Zhu HZ, Andrianova EP, Jiang CY, Li D, Ma L, Feng J, Liu ZP, Xiang H, Zhulin IB, Liu SJ.Cross Talk between Chemosensory Pathways That Modulate Chemotaxis and Biofilm Formation., Defeng Li, 2019
  • Cross Talk between Chemosensory Pathways That Modulate Chemotaxis and Biofilm Formation, Defeng Li, 2019
  • Biochemical and structural characterization of a highly active branched-chain amino acid aminotransferase from Pseudomonas sp. for efficient biosynthesis of chiral amino acids, Defeng Li, 2019
  • Study on Itching Substance and Mechanism in Chinese Yam (Dioscoreae Rhizoma), Defeng Li, 2019
  • The C2′- and C3′-endo equilibrium for AMP molecules bound in the cystathionine-beta-synthase domain, Defeng Li, 2018
  • A potential substrate binding pocket of BdcA plays a critical role in NADPH recognition and biofilm dispersal, Defeng Li, 2018
  • Structural and Functional Characterization of the FadR Regulatory Protein from Vibrio alginolyticus, Defeng Li, 2017
  • Structural analysis of the regulatory mechanism of MarR protein Rv2887 in M. tuberculosis, Defeng Li, 2017
  • Mycobacterium tuberculosis proteasomal ATPase Mpa has a β-grasp domain that hinders docking with the proteasome core protease, Defeng Li, 2017
  • New molecular insights into an archaeal rnase j reveal a conserved processive exoribonucleolysis mechanism of the rnase j family, Defeng Li, 2017
  • Deciphering MCR-2 Colistin Resistance, Defeng Li, 2017
  • Dissemination and Mechanism for the MCR-1 Colistin Resistance, Defeng Li, 2016
  • Origin, dissemination and entry of the pandemic Zika viruses, Defeng Li, 2016
  • Molecular Structural Basis for the Cold Adaptedness of the Psychrophilic β-Glucosidase BglU in Micrococcus antarcticus, Defeng Li, 2016
  • Crystal Structure of the ERp44-Peroxiredoxin 4 Complex Reveals the Molecular Mechanisms of Thiol-Mediated Protein Retention, Defeng Li, 2016
  • Molecular Structural Basis for the Cold Adaptedness of the Psychrophilic beta-Glucosidase BglU in Micrococcus antarcticus, Defeng Li, 2016
  • Crystal structure of Rv3899c 184–410 , a hypothetical protein from Mycobacterium tuberculosis, Defeng Li, 2016
  • Crystallographic observation of the movement of the membrane-distal domain of the T7SS core component EccB1 from Mycobacterium tuberculosis, Defeng Li, 2016
  • Structure of the MarR family protein Rv0880 from Mycobacterium tuberculosis, Defeng Li, 2015
  • Structure and function of Mycobacterium smegmatis 7-keto-8-aminopelargonic acid (KAPA) synthase, Defeng Li, 2015
  • Structural Basis of Specific Recognition of Non-Reducing Terminal N-Acetylglucosamine by an Agrocybe aegerita Lectin, Defeng Li, 2015
  • Biochemical and structural characterization of a novel ubiquitin-conjugating enzyme E2 from Agrocybe aegeria reveals Ube2w family-specific properties, Defeng Li, 2015
  • Core component EccB1 of the Mycobacterium tuberculosis type VII secretion system is a periplasmic ATP
Microbial Degradation Pollutants Adaptation Mechanisms Structural Biology Microorganisms Environmental Adaptation Biochemistry Molecular Biology Chemoreceptors Flagellar Motility

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