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Haipeng Li
Life Science
University of Chinese Academy of Sciences
Shanghai
Language: Chinese, English, German
Computational Biology
Adaptive Evolution
Molecular Mechanism
Detection Algorithm
Evolutionary Genomics
Bioinformatics
Genetic Analysis
Population Genetics
Phylogenetics
Genomic Data
Areas of Focus
- Computational Biology - Adaptive Evolution Theory and Molecular Mechanism Development Detection Algorithm
Work Experience
- 2020-04~Present - Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences - Researcher
- 2007-09~2020-03 - Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences - Researcher
- 2006-09~2007-08 - University of Cologne, Germany - Postdoctoral Researcher
- 2003-09~2006-08 - University of Munich, Germany - Postdoctoral Researcher
- 2002-03~2003-08 - University of Texas, USA - Postdoctoral Researcher
Academic Background & Achievements
- 1996-09--2002-02 PhD: Kunming Institute of Zoology, Chinese Academy of Sciences
- 1992-09--1996-06 Bachelor's: Shandong University
Publications
- Demography as a confounding factor to explain highly diverged loci between cultivated and wild rice, Haipeng Li, 2024
- A noncoding A-to-U Kozak site change related to the high transmissibility of Alpha, Delta, and Omicron VOCs, Haipeng Li, 2023
- Genomic inference of a severe human bottleneck during the Early to Middle Pleistocene transition, Haipeng Li, 2023
- 从进化生物学角度谈为何中国目前需要动态清零而非与新冠病毒共存, 李海鹏, 2022
- Unexpected expression of heat-activated transient receptor potential (TRP) channels in winter torpid bats and cold-activated TRP channels in summer active bats, Haipeng Li, 2022
- Coronavirus GenBrowser for monitoring the transmission and evolution of SARS-CoV-2, Haipeng Li, 2022
- Fine human genetic map based on UK10K data set, Haipeng Li, 2022
- Global cold-chain related SARS-CoV-2 transmission identified by pandemic-scale phylogenomics, Haipeng Li, 2022
- Genome-wide analysis of pseudogenes reveals HBBP1’s human-specific essentiality in erythropoiesis and implication in β-thalassemia, Haipeng Li, 2021
- New exon and accelerated evolution of placental gene Nrk occurred in the ancestral lineage of placental mammals, Haipeng Li, 2021
- Accelerated evolution of an Lhx2 enhancer shapes mammalian social hierarchies, Haipeng Li, 2020
- Genomic consequences of population decline in critically endangered pangolins and their demographic histories, Haipeng Li, 2020
- Convergent genomic signatures of high-altitude adaptation among domestic mammals, Haipeng Li, 2020
- Social enhancer PAS1 and Lhx2 determines social hierarchies in amniotes, Haipeng Li, 2020
- eGPS 1.0: comprehensive software for multi-omic and evolutionary analyses, Haipeng Li, 2019
- Population genetics: From classical statistics to supervised learning, Haipeng Li, 2019
- Evolution of an X-linked miRNA family predominantly expressed in mammalian male germ cells, Haipeng Li, 2019
- The origin and population history of the endangered golden snub-nosed monkey (Rhinopithecus roxellana), Haipeng Li, 2019
- Selection and environmental adaptation along a path to speciation in the Tibetan frog Nanorana parkeri, Haipeng Li, 2018
- Out of southern East Asia of the brown rat revealed by large scale genome sequencing, Haipeng Li, 2018
- Detecting recent positive selection with a single locus test bi-partitioning the coalescent tree, Haipeng Li, 2018
- Genetic variation in glia-neuron signalling modulates ageing rate, Haipeng Li, 2017
- Rapid evolution of genes involved in learning and energy metabolism for domestication of the laboratory rat, Haipeng Li, 2017
- An integrated method for the identification of novel genes related to oral cancer, Haipeng Li, 2017
- A normalization-free and nonparametric method sharpens large-scale transcriptome analysis and reveals common gene alteration patterns in cancers, Haipeng Li, 2017
- A large number of vertebrates began rapid population decline in the late 19th century, Haipeng Li, 2016
- Revisiting the false positive rate in detecting recent positive selection, Haipeng Li, 2016
- Application of the shortest path algorithm for the discovery of breast cancer-related genes, Haipeng Li, 2016
- The use of gene ontology term and KEGG pathway enrichment for analysis of drug half-life, Haipeng Li, 2016
- New Software for the Fast Estimation of Population Recombination Rates (FastEPRR) in the Genomic Era, Haipeng Li, 2016
- Complex Evolutionary Patterns Revealed by Mitochondrial Genomes of the Domestic Horse, Haipeng Li, 2014
- Prediction of Cancer Drugs by Chemical-Chemical Interactions, Haipeng Li, 2014
- Hiv-1 protease cleavage site prediction based on two-stage feature selection method, Haipeng Li, 2013
- Inter- and intra-chain disulfide bond prediction based on optimal feature selection, Haipeng Li, 2013
- A Fast Estimate for the Population Recombination Rate Based on Regression, Haipeng Li, 2013
- Coalescent Tree Imbalance and a Simple Test for Selective Sweeps Based on Microsatellite Variation, Haipeng Li, 2013
- The Hitchhiking Effect of a Strongly Selected Substitution in Male Germline on Neutral Polymorphism in a Monogamy Population, Haipeng Li, 2013
- A Novel Method of Predicting Protein Disordered Regions Based on Sequence Features, Haipeng Li, 2013
- A New Test for Detecting Recent Positive Selection that is Free from the Confounding Impacts of Demography, Haipeng Li, 2011
Awards
- Chinese Academy of Sciences Shanghai Branch 2023 Annual Science and Technology Innovation 'Top Ten Progress' (Basic Research Category), Special Prize, Institute Level, 2024
