Professor | Shaohong Feng | Asia Growth Partners

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Name	Shaohong Feng
Contact Information	fengshaohong@zju.edu.cn
Language ability	Chinese, English
Province	Zhejiang

Upload Avatar (500 x 500)

Name

Shaohong Feng

Contact Information

fengshaohong@zju.edu.cn

Language ability

Chinese, English

Province

Zhejiang

University/Lab Affiliation and Title	Zhejiang University
Faculty	Medical
Academic Background & Achievements	2015.09 – 2019.07 Ph.D. in Genomics: University of Chinese Academy of Sciences 2010.09 – 2012.07 M.Sc. in Agronomy: Iowa State University 2006.09 – 2010.07 B.Sc. in Plant Pathology: China Agricultural University

University/Lab Affiliation and Title

Zhejiang University

Faculty

Medical

Academic Background & Achievements

2015.09 – 2019.07 Ph.D. in Genomics: University of Chinese Academy of Sciences
2010.09 – 2012.07 M.Sc. in Agronomy: Iowa State University
2006.09 – 2010.07 B.Sc. in Plant Pathology: China Agricultural University

Areas of Focus	Analysis of biodiversity patterns and evolutionary mechanisms Research on macroevolutionary rules Analysis of the origin and molecular genetic mechanisms of complex animal traits Species climate response patterns Disease evolution research
Publications	Incomplete lineage sorting and phenotypic evolution in marsupials, Feng, S., Bai, M., Rivas-González, I., Li, C., Liu, S., Tong, Y., Yang, H., Chen, G., Xie, D., Sears, K. E., Franco, L. M., Gaitan-Espitia, J. D., Nespolo, R. F., Johnson, W. E., Yang, H., Brandies, P. A., Hogg, C. J., Belov, K., Renfree, M. B., … Zhang, G., 2022 Dense sampling of bird diversity increases power of comparative genomics, Feng, S., Stiller, J., Deng, Y., Armstrong, J., Fang, Q., Reeve, A. H., Xie, D., Chen, G., Guo, C., Faircloth, B. C., Petersen, B., Wang, Z., Zhou, Q., Diekhans, M., Chen, W., Andreu-Sánchez, S., Margaryan, A., Howard, J. T., Parent, C., … Zhang, G., 2020 The Genomic Footprints of the Fall and Recovery of the Crested Ibis, Feng, S., Fang, Q., Barnett, R., Li, C., Han, S., Kuhlwilm, M., Zhou, L., Pan, H., Deng, Y., Chen, G., Gamauf, A., Woog, F., Prys-Jones, R., Marques-Bonet, T., Gilbert, M. T. P., & Zhang, G., 2019 Progressive Cactus is a multiple-genome aligner for the thousand-genome era, Armstrong, J., Hickey, G., Diekhans, M., Fiddes, I. T., Novak, A. M., Deran, A., Fang, Q., Xie, D., Feng, S., Stiller, J., Genereux, D., Johnson, J., Marinescu, V. D., Alföldi, J., Harris, R. S., Lindblad-Toh, K., Haussler, D., Karlsson, E., Jarvis, E. D., … Paten, B., 2020 Orthologous microsatellites, transposable elements, and DNA deletions correlate with generation time and body mass in neoavian birds, Ji, Y., Feng, S., Wu, L., Fang, Q., Brüniche-Olsen, A., DeWoody, J.A., Cheng, Y., Zhang, D., Hao, Y., Song, G., Qu, Y., Suh, A., Zhang, G., Hackett, S.J., & Lei, F., 2022 Phylogeny and sex chromosome evolution of Palaeognathae, Wang, Z., Zhang, J., Xu, X., Witt, C., Deng, Y., Chen, G., Meng, G., Feng, S., Xu, L., Szekely, T., Zhang, G., & Zhou, Q., 2022 Draft genome assemblies of four manakins, Li, X., Gao, R., Chen, G., Price, A. L., Øksnebjerg, D. B., Hosner, P. A., Zhou, Y., Zhang, G., & Feng, S., 2022 Comparable Number of Genes Having Experienced Positive Selection among Great Ape Species, Xie, D., Chen, G., Meng, X., Wang, H., Bi, X., Fang, M., Yang, C., Zhou, Y., Long, E., & Feng, S., 2021 Genomic insights into the secondary aquatic transition of penguins, Cole, T.L., Zhou, C., Fang, M., Pan, H., Ksepka, D.T., Fiddaman, S.R., Emerling, C.A., Thomas, D.B., Bi, X., Fang, Q., Ellegaard, M.R., Feng, S., … Zhang, G., 2022 A new emu genome illuminates the evolution of genome configuration and nuclear architecture of avian chromosomes, Liu, J., Wang, Z., Li, J., Xu, L., Liu, J., Feng, S., Guo, C., Chen, S., Ren, Z., Rao, J., Wei, K., Chen, Y., Jarvis, E. D., Zhang, G., & Zhou, Q., 2021 A new duck genome reveals conserved and convergently evolved chromosome architectures of birds and mammals, Li, J., Zhang, J., Liu, J., Zhou, Y., Cai, C., Xu, L., Dai, X., Feng, S., Guo, C., Rao, J., Wei, K., Jarvis, E. D., Jiang, Y., Zhou, Z., Zhang, G., & Zhou, Q., 2021 Response of an Afro-Palearctic bird migrant to glaciation cycles, Thorup, K., Pedersen, L., da Fonseca, R. R., Naimi, B., Nogués-Bravo, D., Krapp, M., Manica, A., Willemoes, M., Sjöberg, S., Feng, S., Chen, G., Rey-Iglesia, A., Campos, P. F., Beyer, R., Araújo, M. B., Hansen, A. J., Zhang, G., Tøttrup, A. P., & Rahbek, C., 2021 Kouprey (Bos sauveli) genomes unveil polytomic origin of wild Asian Bos, Sinding, M.-H. S., Ciucani, M. M., Ramos-Madrigal, J., Carmagnini, A., Rasmussen, J. A., Feng, S., Chen, G., Vieira, F. G., Mattiangeli, V., Ganjoo, R. K., Larson, G., Sicheritz-Pontén, T., Petersen, B., Frantz, L., Gilbert, M. T. P., & Bradley, D. G., 2021 Large-scale genomic analysis reveals the genetic cost of chicken domestication, Wang, M., Zhang, J., Guo, X., Li, M., Meyer, R., Ashari, H., Zheng, Z., Wang, S., Peng, M., Jiang, Y., Thakur, M., Suwannapoom, C., Esmailizadeh, A., Hirimuthugoda, N. Y., Zein, M. S. A., Kusza, S., Kharrati-Koopaee, H., Zeng, L., Wang, Y., …, Feng, S., …, Zhang, Y., 2021 A new extinct species of Polynesian sandpiper (Charadriiformes: Scolopacidae: Prosobonia) from Henderson Island, Pitcairn Group, and the phylogenetic relationships of Prosobonia, Pietri, V. L. D., Worthy, T. H., Paul Scofield, R., Cole, T. L., Wood, J. R., Mitchell, K. J., Cibois, A., Jansen, J. J. F., Cooper, A. J., Feng, S., Chen, W., Tennyson, A. J., & Wragg, G. M., 2021 Evolutionary History, Genomic Adaptation to Toxic Diet, and Extinction of the Carolina Parakeet, Gelabert, P., Sandoval-Velasco, M., Serres, A., de Manuel, M., Renom, P., Margaryan, A., Stiller, J., de-Dios, T., Fang, Q., Feng, S., Mañosa, S., Pacheco, G., Ferrando-Bernal, M., Shi, G., Hao, F., Chen, X., Petersen, B., Olsen, R-A., Navarro, A., ... Lalueza-Fox, C., 2020 863 genomes reveal the origin and domestication of chicken, Wang, M., Thakur, M., Peng, M., Jiang, Y., Frantz, L. A. F., Li, M., Zhang, J., Wang, S., Peters, J., Otecko, N. O., Suwannapoom, C., Guo, X., Zheng, Z., Esmailizadeh, A., Hirimuthugoda, N. Y., Ashari, H., Suladari, S., Zein, M. S. A., Kusza, S., …, Feng, S., …, Zhang, Y., 2020 Dynamic evolutionary history and gene content of sex chromosomes across diverse songbirds, Xu, L., Auer, G., Peona, V., Suh, A., Deng, Y., Feng, S., Zhang, G., Blom, M. P. K., Christidis, L., Prost, S., Irestedt, M., & Zhou, Q., 2019 Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours, Kukekova, A. V., Johnson, J. L., Xiang, X., Feng, S., Liu, S., Rando, H. M., Kharlamova, A. V., Herbeck, Y., Serdyukova, N. A., Xiong, Z., Beklemischeva, V., Koepfli, K.-P., Gulevich, R. G., Vladimirova, A. V., Hekman, J. P., Perelman, P. L., Graphodatsky, A. S., O’Brien, S. J., Wang, X., … Zhang, G., 2018 Construction of Red Fox Chromosomal Fragments from the Short-Read Genome Assembly, Rando, H., Farré, M., Robson, M., Won, N., Johnson, J., Buch, R., Bastounes, E., Xiang, X., Feng, S., Liu, S., Xiong, Z., Kim, J., Zhang, G., Trut, L., Larkin, D., & Kukekova, A., 2018

Areas of Focus

Analysis of biodiversity patterns and evolutionary mechanisms
Research on macroevolutionary rules
Analysis of the origin and molecular genetic mechanisms of complex animal traits
Species climate response patterns
Disease evolution research

Publications

Incomplete lineage sorting and phenotypic evolution in marsupials, Feng, S., Bai, M., Rivas-González, I., Li, C., Liu, S., Tong, Y., Yang, H., Chen, G., Xie, D., Sears, K. E., Franco, L. M., Gaitan-Espitia, J. D., Nespolo, R. F., Johnson, W. E., Yang, H., Brandies, P. A., Hogg, C. J., Belov, K., Renfree, M. B., … Zhang, G., 2022
Dense sampling of bird diversity increases power of comparative genomics, Feng, S., Stiller, J., Deng, Y., Armstrong, J., Fang, Q., Reeve, A. H., Xie, D., Chen, G., Guo, C., Faircloth, B. C., Petersen, B., Wang, Z., Zhou, Q., Diekhans, M., Chen, W., Andreu-Sánchez, S., Margaryan, A., Howard, J. T., Parent, C., … Zhang, G., 2020
The Genomic Footprints of the Fall and Recovery of the Crested Ibis, Feng, S., Fang, Q., Barnett, R., Li, C., Han, S., Kuhlwilm, M., Zhou, L., Pan, H., Deng, Y., Chen, G., Gamauf, A., Woog, F., Prys-Jones, R., Marques-Bonet, T., Gilbert, M. T. P., & Zhang, G., 2019
Progressive Cactus is a multiple-genome aligner for the thousand-genome era, Armstrong, J., Hickey, G., Diekhans, M., Fiddes, I. T., Novak, A. M., Deran, A., Fang, Q., Xie, D., Feng, S., Stiller, J., Genereux, D., Johnson, J., Marinescu, V. D., Alföldi, J., Harris, R. S., Lindblad-Toh, K., Haussler, D., Karlsson, E., Jarvis, E. D., … Paten, B., 2020
Orthologous microsatellites, transposable elements, and DNA deletions correlate with generation time and body mass in neoavian birds, Ji, Y., Feng, S., Wu, L., Fang, Q., Brüniche-Olsen, A., DeWoody, J.A., Cheng, Y., Zhang, D., Hao, Y., Song, G., Qu, Y., Suh, A., Zhang, G., Hackett, S.J., & Lei, F., 2022
Phylogeny and sex chromosome evolution of Palaeognathae, Wang, Z., Zhang, J., Xu, X., Witt, C., Deng, Y., Chen, G., Meng, G., Feng, S., Xu, L., Szekely, T., Zhang, G., & Zhou, Q., 2022
Draft genome assemblies of four manakins, Li, X., Gao, R., Chen, G., Price, A. L., Øksnebjerg, D. B., Hosner, P. A., Zhou, Y., Zhang, G., & Feng, S., 2022
Comparable Number of Genes Having Experienced Positive Selection among Great Ape Species, Xie, D., Chen, G., Meng, X., Wang, H., Bi, X., Fang, M., Yang, C., Zhou, Y., Long, E., & Feng, S., 2021
Genomic insights into the secondary aquatic transition of penguins, Cole, T.L., Zhou, C., Fang, M., Pan, H., Ksepka, D.T., Fiddaman, S.R., Emerling, C.A., Thomas, D.B., Bi, X., Fang, Q., Ellegaard, M.R., Feng, S., … Zhang, G., 2022
A new emu genome illuminates the evolution of genome configuration and nuclear architecture of avian chromosomes, Liu, J., Wang, Z., Li, J., Xu, L., Liu, J., Feng, S., Guo, C., Chen, S., Ren, Z., Rao, J., Wei, K., Chen, Y., Jarvis, E. D., Zhang, G., & Zhou, Q., 2021
A new duck genome reveals conserved and convergently evolved chromosome architectures of birds and mammals, Li, J., Zhang, J., Liu, J., Zhou, Y., Cai, C., Xu, L., Dai, X., Feng, S., Guo, C., Rao, J., Wei, K., Jarvis, E. D., Jiang, Y., Zhou, Z., Zhang, G., & Zhou, Q., 2021
Response of an Afro-Palearctic bird migrant to glaciation cycles, Thorup, K., Pedersen, L., da Fonseca, R. R., Naimi, B., Nogués-Bravo, D., Krapp, M., Manica, A., Willemoes, M., Sjöberg, S., Feng, S., Chen, G., Rey-Iglesia, A., Campos, P. F., Beyer, R., Araújo, M. B., Hansen, A. J., Zhang, G., Tøttrup, A. P., & Rahbek, C., 2021
Kouprey (Bos sauveli) genomes unveil polytomic origin of wild Asian Bos, Sinding, M.-H. S., Ciucani, M. M., Ramos-Madrigal, J., Carmagnini, A., Rasmussen, J. A., Feng, S., Chen, G., Vieira, F. G., Mattiangeli, V., Ganjoo, R. K., Larson, G., Sicheritz-Pontén, T., Petersen, B., Frantz, L., Gilbert, M. T. P., & Bradley, D. G., 2021
Large-scale genomic analysis reveals the genetic cost of chicken domestication, Wang, M., Zhang, J., Guo, X., Li, M., Meyer, R., Ashari, H., Zheng, Z., Wang, S., Peng, M., Jiang, Y., Thakur, M., Suwannapoom, C., Esmailizadeh, A., Hirimuthugoda, N. Y., Zein, M. S. A., Kusza, S., Kharrati-Koopaee, H., Zeng, L., Wang, Y., …, Feng, S., …, Zhang, Y., 2021
A new extinct species of Polynesian sandpiper (Charadriiformes: Scolopacidae: Prosobonia) from Henderson Island, Pitcairn Group, and the phylogenetic relationships of Prosobonia, Pietri, V. L. D., Worthy, T. H., Paul Scofield, R., Cole, T. L., Wood, J. R., Mitchell, K. J., Cibois, A., Jansen, J. J. F., Cooper, A. J., Feng, S., Chen, W., Tennyson, A. J., & Wragg, G. M., 2021
Evolutionary History, Genomic Adaptation to Toxic Diet, and Extinction of the Carolina Parakeet, Gelabert, P., Sandoval-Velasco, M., Serres, A., de Manuel, M., Renom, P., Margaryan, A., Stiller, J., de-Dios, T., Fang, Q., Feng, S., Mañosa, S., Pacheco, G., Ferrando-Bernal, M., Shi, G., Hao, F., Chen, X., Petersen, B., Olsen, R-A., Navarro, A., ... Lalueza-Fox, C., 2020
863 genomes reveal the origin and domestication of chicken, Wang, M., Thakur, M., Peng, M., Jiang, Y., Frantz, L. A. F., Li, M., Zhang, J., Wang, S., Peters, J., Otecko, N. O., Suwannapoom, C., Guo, X., Zheng, Z., Esmailizadeh, A., Hirimuthugoda, N. Y., Ashari, H., Suladari, S., Zein, M. S. A., Kusza, S., …, Feng, S., …, Zhang, Y., 2020
Dynamic evolutionary history and gene content of sex chromosomes across diverse songbirds, Xu, L., Auer, G., Peona, V., Suh, A., Deng, Y., Feng, S., Zhang, G., Blom, M. P. K., Christidis, L., Prost, S., Irestedt, M., & Zhou, Q., 2019
Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours, Kukekova, A. V., Johnson, J. L., Xiang, X., Feng, S., Liu, S., Rando, H. M., Kharlamova, A. V., Herbeck, Y., Serdyukova, N. A., Xiong, Z., Beklemischeva, V., Koepfli, K.-P., Gulevich, R. G., Vladimirova, A. V., Hekman, J. P., Perelman, P. L., Graphodatsky, A. S., O’Brien, S. J., Wang, X., … Zhang, G., 2018
Construction of Red Fox Chromosomal Fragments from the Short-Read Genome Assembly, Rando, H., Farré, M., Robson, M., Won, N., Johnson, J., Buch, R., Bastounes, E., Xiang, X., Feng, S., Liu, S., Xiong, Z., Kim, J., Zhang, G., Trut, L., Larkin, D., & Kukekova, A., 2018

Biodiversity Evolution Genomics Phylogenetics Molecular Ecology Comparative Genomics Species Adaptation Climate Change Disease Evolution Phenotypic Evolution

Jun Ma - Zhejiang University

Xiaoting Hua - Zhejiang University

Qiyuan Li - Xiamen University

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