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Jianshi Jin
Zoology
Chinese Academy of Sciences
Beijing
Language: Chinese, English, Japanese
Microbiome
Ecosystem
Health
Disease
Biodiversity
Agriculture
Big Data
Ai
Biotechnology
Control
Areas of Focus
- Microbiome in ecosystems
- Single-cell sequencing and imaging technologies
Work Experience
- 2016-2023 - RIKEN, Japan - JSPS fellow, Research Scientist, Senior Scientist
Academic Background & Achievements
- 2009 - Bachelor's Degree: Nanjing University
- 2014 - Doctorate: Peking University
- 2010-2011 - Visiting Scholar: Harvard University
- 2014-2016 - Postdoctoral Research: Peking University
- Achievement: Published in Science, Nature Communications, Nature Protocols, Science Immunology, PNAS, The Journal of Immunology
- Achievement: Applied for multiple international PCT patents
Publications
- High-throughput identification and quantification of bacterial cells in the microbiota based on 16S rRNA sequencing with single-base accuracy using BarBIQ., Jianshi Jin, Reiko Yamamoto, Katsuyuki Shiroguchi, 2023
- Robotic data acquisition with deep learning enables cell image-based prediction of transcriptomic states., Jianshi Jin, Taisaku Ogawa, Nozomi Hojo, Kirill Kryukov, Kenji Shimizu, Tomokatsu Ikawa, Tadashi Imanishi, Taku Okazaki, Katsuyuki Shiroguchi, 2023
- CD45 alleviates airway inflammation and lung fibrosis by limiting expansion and activation of ILC2s., Guangwei Cui, Akihiro Shimba, Jianshi Jin, Nozomi Hojo, Takuma Asahi, Shinya Abe, Aki Ejima, Shinri Okada, Keizo Ohira, Ryoma Kato, Shizue Tani-ichi, Ryo Yamada, Takashi Ebihara, Katsuyuki Shiroguchi, Koichi Ikuta, 2023
- Sensory neuronal STAT3 is critical for IL-31 receptor expression and inflammatory itch., Sonoko Takahashi, Sotaro Ochiai, Jianshi Jin, Noriko Takahashi, Susumu Toshima, Harumichi Ishigame, Kenji Kabashima, Masato Kubo, Manabu Nakayama, Katsuyuki Shiroguchi, Takaharu Okada, 2023
- High-throughput identification and quantification of single bacterial cells in the microbiota., Jianshi Jin, Reiko Yamamoto, Tadashi Takeuchi, Guangwei Cui, Eiji Miyauchi, Nozomi Hojo, Koichi Ikuta, Hiroshi Ohno, Katsuyuki Shiroguchi, 2022
- A circulating subset of iNKT cells mediates antitumor and antiviral immunity., Guangwei Cui, Akihiro Shimba, Jianshi Jin, Taisaku Ogawa, Yukiko Muramoto, et al., 2022
- Cancer biology deciphered by single-cell transcriptomic sequencing., Yanmeng Li, Jianshi Jin, Fan Bai, 2022
- Method for treating cell population and method for analyzing genes included in cell population., Katsuyuki Shiroguchi, Jianshi Jin, Reiko Yamamoto, 2021
- Nonspecific DNA Binding of cGAS N Terminus Promotes cGAS Activation., Jianli Tao, Xiao-Wei Zhang, Jianshi Jin, Xiao-Xia Du, Tengfei Lian, Jing Yang, Xiang Zhou, Zhengfan Jiang, Xiao-Dong Su, 2017
- The effects of cytosine methylation on general transcriptional factors., Jianshi Jin, Tengfei Lian, Chan Gu, Kai Yu, Yi Qin Gao, Xiao-Dong Su, 2016
- High-accuracy mapping protein binding stability on nucleosomal DNA using single-molecule method., Jianshi Jin, Tengfei Lian, X. Sunney Xie, Xiao-Dong Su, 2014
- Probing Allostery Through DNA., Sangjin Kim, Erik Brostromer, Dong Xing, Jianshi Jin, Shasha Chong, Hao Ge, Siyuan Wang, Chan Gu, Lijiang Yang, Yi Qin Gao, Xiao-dong Su, Yujie Sun, X. Sunney Xie, 2013
Awards
- Sakura Award: RIKEN, Japan
- JSPS Postdoctoral Fellowship: Japan
- Outstanding Doctoral Dissertation: Peking University
- Outstanding Postdoctoral Fund: Peking University-Tsinghua University Joint Center for Life Sciences
