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Jinyang Zhang
Zoology
Chinese Academy of Sciences
Beijing
Language: Chinese, English
Non-Coding Rna
Computational Biology
Bioinformatics
Rna Structure
Regulatory Functions
Big Data
Omics
Circular Rna
Artificial Intelligence
Methodology Development
Areas of Focus
- Development of computational methodologies related to non-coding RNA
- Exploration of the composition and regulatory functions of non-coding RNA
Work Experience
- 2021.08 – 2023.07 - Institute of Zoology, Chinese Academy of Sciences - Special Research Assistant (Postdoctoral)
- 2023.07 - Present - Institute of Zoology, Chinese Academy of Sciences - Associate Researcher
Academic Background & Achievements
- 2011.09 - 2015.07 Bachelor's Degree in Biological Sciences: Peking University
- 2015.09 - 2021.07 PhD in Genetics: University of Chinese Academy of Sciences
- Research achievements selected as one of the top ten advances in bioinformatics in China in 2019 and 2021
- Recipient of the Special Award from the President of the Chinese Academy of Sciences
- Recipient of the Beijing Outstanding Graduate Award
- Recipient of the Outstanding Doctoral Dissertation Award from the Chinese Academy of Sciences
Publications
- Real-time and programmable transcriptome sequencing with PROFIT-seq, Zhang J#, Hou L#, Ma L#, Cai Z, Ye S, Liu Y, Ji P, Zuo Z, Zhao F, 2024
- CIRI-deep Enables Single-cell and Spatial Transcriptomic Analysis of Circular RNAs with Deep Learning, Zhou Z#, Zhang J#, Zheng X, Pan Z, Zhao F*, Gao Y*, 2024
- circAtlas 3.0: a gateway to 3 million curated vertebrate circular RNAs through a standardized nomenclature scheme, Wu W, Zhao F*, Zhang J*, 2023
- Full-length circular RNA profiling by nanopore sequencing with CIRI-long, Hou L#, Zhang J#*, Zhao F*, 2023
- Exploring the cellular landscape of circular RNAs using full-length single-cell RNA sequencing, Wu W#, Zhang J#, Zhao F, 2022
- circVAMP3 drives CAPRIN1 phase separation and inhibits hepatocellular carcinoma by suppressing c-Myc translation, Chen S#, Cao X#, Zhang J#, Wu W, Zhang B, Zhao F, 2022
- Screening linear and circular RNA transcripts from stress granules, Chen S#, Zhang J#, Zhao F, 2022
- Characterizing circular RNAs using nanopore sequencing, Zhang J & Zhao F, 2021
- Reconstruction of circular RNAs using Illumina and Nanopore RNA-seq datasets, Zhang J & Zhao F, 2021
- Comprehensive profiling of circular RNAs with nanopore sequencing and CIRI-long, Zhang J#, Hou L#, Zuo Z#, Ji P, Zhang X, Xue Y, Zhao F, 2021
- Accurate quantification of circular RNAs identifies extensive circular isoform switching events, Zhang J, Chen S, Yang J, Zhao F, 2020
Awards
- Special Award from the President of the Chinese Academy of Sciences
- Beijing Outstanding Graduate Award
- Outstanding Doctoral Dissertation Award from the Chinese Academy of Sciences
