Areas of Focus
- Plant genomics and bioinformatics
- Machine learning and AI in genomics
Academic Background & Achievements
- 2016.09.01-2020.06.15 PhD in Crop Genetics and Breeding, China Agricultural University
- 2008.09.01-2011.06.22 Master of Science in Marine Biology, Tsinghua University
- 2004.09.01-2008.07.01 Bachelor of Science in Biological Sciences, China Agricultural University
Publications
- iFLAS: positive-unlabeled learning facilitates full-length transcriptome-based identification and functional exploration of alternatively spliced isoforms in maize, Xu F, Liu S, Zhao A, Shang M, Wang Q, Jiang S, Cheng Q, Chen X, Zhai X, Zhang J, Wang X, Yan J, 2024
- G2P Provides an Integrative Environment for Multi-model genomic selection analysis to improve genotype-to-phenotype prediction, Wang Q, Jiang S, Li T, Qiu Z, Yan J, Fu R, Ma C, Wang X, Jiang S, Cheng Q, 2023
- Machine learning bridges omics sciences and plant breeding, Yan J, Wang X, 2023
- Unsupervised and semi-supervised learning: the next frontier in machine learning for plant systems biology, Yan J, Wang X, 2022
- MODAS: exploring maize germplasm with multi-omics data association studies, Liu S, Xu F, Xu Y, Wang Q, Yan J, Wang J, Wang X, Wang X, 2022
- Resequencing 250 soybean accessions: new insights into genes associated with agronomic traits and genetic networks, Yang C, Yan J, Jiang S, Li X, Min H, Wang X, Hao D, 2022
- LightGBM: Accelerated genomically designed crop breeding through ensemble learning, Yan J, Xu Y, Cheng Q, Jiang S, Xiao Y, Ma C, Yan J B, Wang X, 2021
- The genetic mechanism of heterosis utilization in maize improvement, Xiao Y, Jiang S, Cheng Q, Wang X, Yan J, Zhang R, Qiao F, Ma C, Luo J, Li W, Liu H, Yang W, Song W, Meng Y, Warburton M L, Zhao J, Wang X, Yan J B, 2021
- obaDIA: one-step biological analysis pipeline for data-independent acquisition and other quantitative proteomics data, Yan J, Zhai H, Zhu L, Sa S, Ding X, 2021
- SR4R: An integrative SNP resource for genomic breeding and population research in rice, Yan J, Zou D, Li C, Zhang Z, Song S, Wang X, 2020
- Genome optimization for improvement of maize breeding, Jiang S, Cheng Q, Yan J, Fu R, Wang X, 2020
- Powdery mildews are characterized by contracted carbohydrate metabolism and diverse effectors to adapt to obligate biotrophic lifestyle, Liang P, Liu S, Xu F, Jiang S, Yan J, He Q, Liu W, Lin C, Zheng F, Wang X, Miao W, 2018
- Hybrid sequencing of full-length cDNA transcripts of stems and leaves in Dendrobium officinale, He L, Fu S, Xu Z, Yan J, Xu J, Zhou H, Zhou J, Chen X, Li Y, Au K F, Yao H, 2017
- mRNA and small RNA transcriptomes reveal insights into dynamic homoeolog regulation of allopolyploid heterosis in nascent hexaploid wheat, Li A, Liu D, Wu J, Zhao X, Hao M, Geng S, Yan J, Jiang X, Zhang L, Wu J, Yin L, Zhang R, Wu L, Zheng Y, Mao L, 2014
- Molecular evolution and functional divergence of the cytochrome P450 3(CYP3) family in Actinopterygii (ray-finned fish), Yan J, Cai Z, 2010
