Professor | Peilin Jia | Asia Growth Partners

	Upload Avatar (500 x 500)
Name	Peilin Jia
Contact Information	pjia@big.ac.cn
Language ability	Chinese, English
Province	Beijing

Upload Avatar (500 x 500)

Name

Peilin Jia

Contact Information

pjia@big.ac.cn

Language ability

Chinese, English

Province

Beijing

University/Lab Affiliation and Title	University of Chinese Academy of Sciences
Faculty	Life Sciences
Academic Background & Achievements	1999-09 to 2003-07 Bachelor's Degree: Dalian University of Technology, Bioengineering 2003-09 to 2008-07 Doctorate Degree: Shanghai Institute of Life Sciences, Chinese Academy of Sciences, Bioinformatics

University/Lab Affiliation and Title

University of Chinese Academy of Sciences

Faculty

Life Sciences

Academic Background & Achievements

1999-09 to 2003-07 Bachelor's Degree: Dalian University of Technology, Bioengineering
2003-09 to 2008-07 Doctorate Degree: Shanghai Institute of Life Sciences, Chinese Academy of Sciences, Bioinformatics

Areas of Focus	Precision Health: Genetic research of human complex diseases Precision Health: Cancer omics research Brain-related disease research
Publications	COLOCdb: a comprehensive resource for multi-model colocalization of complex traits., Siyu Pan, Hongen Kang, Xinxuan Liu, Shuhua Li, Peng Yang, Mingqiu Wu, Na Yuan, Shiqi Lin, Qiwen Zheng, Peilin Jia., 2023 TargetGene: a comprehensive database of cell-type-specific target genes for genetic variants., Shiqi Lin, Song Wu, Wei Zhao, Zhanjie Fang, Hongen Kang, Xinxuan Liu, Siyu Pan, Fudong Yu, Yiming Bao, Peilin Jia., 2023 Benchmark of embedding-based methods for accurate and transferable prediction of drug response., Jia, Peilin, Hu, Ruifeng, Zhao, Zhongming., 2023 PharmGWAS: a GWAS-based knowledgebase for drug repurposing., Hongen Kang, Siyu Pan, Shiqi Lin, YinYing Wang, Na Yuan, Peilin Jia., 2023 deCS: A Tool for Systematic Cell Type Annotations of Single-cell RNA Sequencing Data among Human Tissues., Pei, Guangsheng, Yan, Fangfang, Simon, Lukas M, Dai, Yulin, Jia, Peilin, Zhao, Zhongming., 2023 Brain Catalog: a comprehensive resource for the genetic landscape of brain-related traits., Pan, Siyu, Kang, Hongen, Liu, Xinxuan, Lin, Shiqi, Yuan, Na, Zhang, Zhang, Bao, Yiming, Jia, Peilin., 2023 Dynamic cellular changes in acute kidney injury caused by different ischemia time., Dan Shan, YinYing Wang, Yuan Chang, Hao Cui, Menghao Tao, Yixuan Sheng, Hongen Kang, Peilin Jia, Jiangping Song., 2023 CeDR Atlas: a knowledgebase of cellular drug response., Wang, YinYing, Kang, Hongen, Xu, Tianyi, Hao, Lili, Bao, Yiming, Jia, Peilin., 2022 Cell-type deconvolution analysis identifies cancer-associated myofibroblast component as a poor prognostic factor in multiple cancer types., Li, Bingrui, Pei, Guangsheng, Yao, Jun, Ding, Qingqing, Jia, Peilin, Zhao, Zhongming., 2021 DeepFun: a deep learning sequence-based model to decipher non-coding variant effect in a tissue- and cell type-specific manner., Pei, Guangsheng, Hu, Ruifeng, Jia, Peilin, Zhao, Zhongming., 2021 Deep generative neural network for accurate drug response imputation., Jia, Peilin, Hu, Ruifeng, Pei, Guangsheng, Dai, Yulin, Wang, YinYing, Zhao, Zhongming., 2021 Distinct effect of prenatal and postnatal brain expression across 20 brain disorders and anthropometric social traits: a systematic study of spatiotemporal modularity., Jia Peilin., 2021 Predicting regulatory variants using a dense epigenomic mapped CNN model elucidated the molecular basis of trait-tissue associations., Jia Peilin., 2020 Decoding whole-genome mutational signatures in 37 human pan-cancers by denoising sparse autoencoder neural network., Pei, Guangsheng, Hu, Ruifeng, Dai, Yulin, Zhao, Zhongming, Jia, Peilin., 2020 TSEA-DB: a trait tissue association map for human complex traits and diseases., Jia, Peilin, Dai, Yulin, Hu, Ruifeng, Pei, Guangsheng, Manuel, Astrid Marilyn, Zhao, Zhongming., 2020 Gene expression imputation and cell-type deconvolution in human brain with spatiotemporal precision and its implications for brain-related disorders., Jia Peilin., 2020 Mega-analysis of Odds Ratio: A Convergent Method for a Deep Understanding of the Genetic Evidence in Schizophrenia., Jia, Peilin, Chen, Xiangning, Xie, Wei, Kendler, Kenneth S, Zhao, Zhongming., 2019 deTS: tissue-specific enrichment analysis to decode tissue specificity., Pei, Guangsheng, Dai, Yulin, Zhao, Zhongming, Jia, Peilin., 2019 CNet: a multi-omics approach to detecting clinically associated, combinatory genomic signatures., Jia, Peilin, Pei, Guangsheng, Zhao, Zhongming., 2019 Characterization of Tumor-Suppressor Gene Inactivation Events in 33 Cancer Types., Jia, Peilin, Zhao, Zhongming., 2019 Deciphering mechanisms of cardiomyocytes and non-cardiomyocyte transformation in myocardial remodeling of permanent atrial fibrillation., Yixuan Sheng, YinYing Wang, Yuan Chang, Dongting Ye, Liying Wu, Hongen Kang, Xiong Zhang, Xiao Chen, Bin Li, Daliang Zhu, Ningning Zhang, Haisen Zhao, Aijun Chen, Haisheng Chen, Peilin Jia, Jiangping Song., 2023 deCS: A tool for systematic cell type annotations of single-cell RNA sequencing data among human tissues., Guangsheng Pei, Fangfang Yan, Lukas M Simon, Yulin Dai, Peilin Jia, Zhongming Zhao., 2023

Areas of Focus

Precision Health: Genetic research of human complex diseases
Precision Health: Cancer omics research
Brain-related disease research

Publications

COLOCdb: a comprehensive resource for multi-model colocalization of complex traits., Siyu Pan, Hongen Kang, Xinxuan Liu, Shuhua Li, Peng Yang, Mingqiu Wu, Na Yuan, Shiqi Lin, Qiwen Zheng, Peilin Jia., 2023
TargetGene: a comprehensive database of cell-type-specific target genes for genetic variants., Shiqi Lin, Song Wu, Wei Zhao, Zhanjie Fang, Hongen Kang, Xinxuan Liu, Siyu Pan, Fudong Yu, Yiming Bao, Peilin Jia., 2023
Benchmark of embedding-based methods for accurate and transferable prediction of drug response., Jia, Peilin, Hu, Ruifeng, Zhao, Zhongming., 2023
PharmGWAS: a GWAS-based knowledgebase for drug repurposing., Hongen Kang, Siyu Pan, Shiqi Lin, YinYing Wang, Na Yuan, Peilin Jia., 2023
deCS: A Tool for Systematic Cell Type Annotations of Single-cell RNA Sequencing Data among Human Tissues., Pei, Guangsheng, Yan, Fangfang, Simon, Lukas M, Dai, Yulin, Jia, Peilin, Zhao, Zhongming., 2023
Brain Catalog: a comprehensive resource for the genetic landscape of brain-related traits., Pan, Siyu, Kang, Hongen, Liu, Xinxuan, Lin, Shiqi, Yuan, Na, Zhang, Zhang, Bao, Yiming, Jia, Peilin., 2023
Dynamic cellular changes in acute kidney injury caused by different ischemia time., Dan Shan, YinYing Wang, Yuan Chang, Hao Cui, Menghao Tao, Yixuan Sheng, Hongen Kang, Peilin Jia, Jiangping Song., 2023
CeDR Atlas: a knowledgebase of cellular drug response., Wang, YinYing, Kang, Hongen, Xu, Tianyi, Hao, Lili, Bao, Yiming, Jia, Peilin., 2022
Cell-type deconvolution analysis identifies cancer-associated myofibroblast component as a poor prognostic factor in multiple cancer types., Li, Bingrui, Pei, Guangsheng, Yao, Jun, Ding, Qingqing, Jia, Peilin, Zhao, Zhongming., 2021
DeepFun: a deep learning sequence-based model to decipher non-coding variant effect in a tissue- and cell type-specific manner., Pei, Guangsheng, Hu, Ruifeng, Jia, Peilin, Zhao, Zhongming., 2021
Deep generative neural network for accurate drug response imputation., Jia, Peilin, Hu, Ruifeng, Pei, Guangsheng, Dai, Yulin, Wang, YinYing, Zhao, Zhongming., 2021
Distinct effect of prenatal and postnatal brain expression across 20 brain disorders and anthropometric social traits: a systematic study of spatiotemporal modularity., Jia Peilin., 2021
Predicting regulatory variants using a dense epigenomic mapped CNN model elucidated the molecular basis of trait-tissue associations., Jia Peilin., 2020
Decoding whole-genome mutational signatures in 37 human pan-cancers by denoising sparse autoencoder neural network., Pei, Guangsheng, Hu, Ruifeng, Dai, Yulin, Zhao, Zhongming, Jia, Peilin., 2020
TSEA-DB: a trait tissue association map for human complex traits and diseases., Jia, Peilin, Dai, Yulin, Hu, Ruifeng, Pei, Guangsheng, Manuel, Astrid Marilyn, Zhao, Zhongming., 2020
Gene expression imputation and cell-type deconvolution in human brain with spatiotemporal precision and its implications for brain-related disorders., Jia Peilin., 2020
Mega-analysis of Odds Ratio: A Convergent Method for a Deep Understanding of the Genetic Evidence in Schizophrenia., Jia, Peilin, Chen, Xiangning, Xie, Wei, Kendler, Kenneth S, Zhao, Zhongming., 2019
deTS: tissue-specific enrichment analysis to decode tissue specificity., Pei, Guangsheng, Dai, Yulin, Zhao, Zhongming, Jia, Peilin., 2019
CNet: a multi-omics approach to detecting clinically associated, combinatory genomic signatures., Jia, Peilin, Pei, Guangsheng, Zhao, Zhongming., 2019
Characterization of Tumor-Suppressor Gene Inactivation Events in 33 Cancer Types., Jia, Peilin, Zhao, Zhongming., 2019
Deciphering mechanisms of cardiomyocytes and non-cardiomyocyte transformation in myocardial remodeling of permanent atrial fibrillation., Yixuan Sheng, YinYing Wang, Yuan Chang, Dongting Ye, Liying Wu, Hongen Kang, Xiong Zhang, Xiao Chen, Bin Li, Daliang Zhu, Ningning Zhang, Haisen Zhao, Aijun Chen, Haisheng Chen, Peilin Jia, Jiangping Song., 2023
deCS: A tool for systematic cell type annotations of single-cell RNA sequencing data among human tissues., Guangsheng Pei, Fangfang Yan, Lukas M Simon, Yulin Dai, Peilin Jia, Zhongming Zhao., 2023

Genetics Complex Diseases Pathogenic Genes Statistical Methods Mathematical Methods Data Mining Bioinformatics Algorithms Tools Disease Mechanisms Cancer Somatic Mutations Cancer Genes Cell Impact Deep Learning Personalized Treatment Cancer Causes Genetic Research Omics Brain Diseases Mental Disorders Degenerative Diseases Cognitive Disorders Computational Methods Multi-Omics Data Genetic Basis Disease Correlation Analysis Integration

Ruixin Zhu - Tongji University

Jianwei Liu - Central South University

Yudong Cai - Shanghai University

View All

Personal Information

Academic Information

Research

Contact us

No account yet?

Personal Information

Academic Information

Research

Contact us