Professor | 贾佩林 | 数字化转型顾问

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Name	贾佩林
Contact Information	pjia@big.ac.cn
Language ability	中文, 英语
Province	北京

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Name

贾佩林

Contact Information

pjia@big.ac.cn

Language ability

中文, 英语

Province

北京

University/Lab Affiliation and Title	中国科学院大学
Faculty	Life Sciences
Academic Background & Achievements	1999年9月-2003年7月学士学位: 大连理工大学，生物工程专业 2003年9月-2008年7月博士学位: 中科院上海生命科学研究院，生物信息专业

University/Lab Affiliation and Title

中国科学院大学

Faculty

Life Sciences

Academic Background & Achievements

1999年9月-2003年7月学士学位: 大连理工大学，生物工程专业
2003年9月-2008年7月博士学位: 中科院上海生命科学研究院，生物信息专业

Areas of Focus	精准健康：人类复杂疾病的遗传学研究精准健康：癌症组学研究脑相关疾病研究
Publications	COLOCdb: a comprehensive resource for multi-model colocalization of complex traits., Siyu Pan, Hongen Kang, Xinxuan Liu, Shuhua Li, Peng Yang, Mingqiu Wu, Na Yuan, Shiqi Lin, Qiwen Zheng, Peilin Jia., 2023 TargetGene: a comprehensive database of cell-type-specific target genes for genetic variants., Shiqi Lin, Song Wu, Wei Zhao, Zhanjie Fang, Hongen Kang, Xinxuan Liu, Siyu Pan, Fudong Yu, Yiming Bao, Peilin Jia., 2023 Benchmark of embedding-based methods for accurate and transferable prediction of drug response., Jia, Peilin, Hu, Ruifeng, Zhao, Zhongming., 2023 PharmGWAS: a GWAS-based knowledgebase for drug repurposing., Hongen Kang, Siyu Pan, Shiqi Lin, YinYing Wang, Na Yuan, Peilin Jia., 2023 deCS: A Tool for Systematic Cell Type Annotations of Single-cell RNA Sequencing Data among Human Tissues., Pei, Guangsheng, Yan, Fangfang, Simon, Lukas M, Dai, Yulin, Jia, Peilin, Zhao, Zhongming., 2023 Brain Catalog: a comprehensive resource for the genetic landscape of brain-related traits., Pan, Siyu, Kang, Hongen, Liu, Xinxuan, Lin, Shiqi, Yuan, Na, Zhang, Zhang, Bao, Yiming, Jia, Peilin., 2023 Dynamic cellular changes in acute kidney injury caused by different ischemia time., Dan Shan, YinYing Wang, Yuan Chang, Hao Cui, Menghao Tao, Yixuan Sheng, Hongen Kang, Peilin Jia, Jiangping Song., 2023 CeDR Atlas: a knowledgebase of cellular drug response., Wang, YinYing, Kang, Hongen, Xu, Tianyi, Hao, Lili, Bao, Yiming, Jia, Peilin., 2022 Cell-type deconvolution analysis identifies cancer-associated myofibroblast component as a poor prognostic factor in multiple cancer types., Li, Bingrui, Pei, Guangsheng, Yao, Jun, Ding, Qingqing, Jia, Peilin, Zhao, Zhongming., 2021 DeepFun: a deep learning sequence-based model to decipher non-coding variant effect in a tissue- and cell type-specific manner., Pei, Guangsheng, Hu, Ruifeng, Jia, Peilin, Zhao, Zhongming., 2021 Deep generative neural network for accurate drug response imputation., Jia, Peilin, Hu, Ruifeng, Pei, Guangsheng, Dai, Yulin, Wang, YinYing, Zhao, Zhongming., 2021 Distinct effect of prenatal and postnatal brain expression across 20 brain disorders and anthropometric social traits: a systematic study of spatiotemporal modularity., Jia Peilin., 2021 Predicting regulatory variants using a dense epigenomic mapped CNN model elucidated the molecular basis of trait-tissue associations., Jia Peilin., 2020 Decoding whole-genome mutational signatures in 37 human pan-cancers by denoising sparse autoencoder neural network., Pei, Guangsheng, Hu, Ruifeng, Dai, Yulin, Zhao, Zhongming, Jia, Peilin., 2020 TSEA-DB: a trait tissue association map for human complex traits and diseases., Jia, Peilin, Dai, Yulin, Hu, Ruifeng, Pei, Guangsheng, Manuel, Astrid Marilyn, Zhao, Zhongming., 2020 Gene expression imputation and cell-type deconvolution in human brain with spatiotemporal precision and its implications for brain-related disorders., Jia Peilin., 2020 Mega-analysis of Odds Ratio: A Convergent Method for a Deep Understanding of the Genetic Evidence in Schizophrenia., Jia, Peilin, Chen, Xiangning, Xie, Wei, Kendler, Kenneth S, Zhao, Zhongming., 2019 deTS: tissue-specific enrichment analysis to decode tissue specificity., Pei, Guangsheng, Dai, Yulin, Zhao, Zhongming, Jia, Peilin., 2019 CNet: a

Areas of Focus

精准健康：人类复杂疾病的遗传学研究
精准健康：癌症组学研究
脑相关疾病研究

Publications

COLOCdb: a comprehensive resource for multi-model colocalization of complex traits., Siyu Pan, Hongen Kang, Xinxuan Liu, Shuhua Li, Peng Yang, Mingqiu Wu, Na Yuan, Shiqi Lin, Qiwen Zheng, Peilin Jia., 2023
TargetGene: a comprehensive database of cell-type-specific target genes for genetic variants., Shiqi Lin, Song Wu, Wei Zhao, Zhanjie Fang, Hongen Kang, Xinxuan Liu, Siyu Pan, Fudong Yu, Yiming Bao, Peilin Jia., 2023
Benchmark of embedding-based methods for accurate and transferable prediction of drug response., Jia, Peilin, Hu, Ruifeng, Zhao, Zhongming., 2023
PharmGWAS: a GWAS-based knowledgebase for drug repurposing., Hongen Kang, Siyu Pan, Shiqi Lin, YinYing Wang, Na Yuan, Peilin Jia., 2023
deCS: A Tool for Systematic Cell Type Annotations of Single-cell RNA Sequencing Data among Human Tissues., Pei, Guangsheng, Yan, Fangfang, Simon, Lukas M, Dai, Yulin, Jia, Peilin, Zhao, Zhongming., 2023
Brain Catalog: a comprehensive resource for the genetic landscape of brain-related traits., Pan, Siyu, Kang, Hongen, Liu, Xinxuan, Lin, Shiqi, Yuan, Na, Zhang, Zhang, Bao, Yiming, Jia, Peilin., 2023
Dynamic cellular changes in acute kidney injury caused by different ischemia time., Dan Shan, YinYing Wang, Yuan Chang, Hao Cui, Menghao Tao, Yixuan Sheng, Hongen Kang, Peilin Jia, Jiangping Song., 2023
CeDR Atlas: a knowledgebase of cellular drug response., Wang, YinYing, Kang, Hongen, Xu, Tianyi, Hao, Lili, Bao, Yiming, Jia, Peilin., 2022
Cell-type deconvolution analysis identifies cancer-associated myofibroblast component as a poor prognostic factor in multiple cancer types., Li, Bingrui, Pei, Guangsheng, Yao, Jun, Ding, Qingqing, Jia, Peilin, Zhao, Zhongming., 2021
DeepFun: a deep learning sequence-based model to decipher non-coding variant effect in a tissue- and cell type-specific manner., Pei, Guangsheng, Hu, Ruifeng, Jia, Peilin, Zhao, Zhongming., 2021
Deep generative neural network for accurate drug response imputation., Jia, Peilin, Hu, Ruifeng, Pei, Guangsheng, Dai, Yulin, Wang, YinYing, Zhao, Zhongming., 2021
Distinct effect of prenatal and postnatal brain expression across 20 brain disorders and anthropometric social traits: a systematic study of spatiotemporal modularity., Jia Peilin., 2021
Predicting regulatory variants using a dense epigenomic mapped CNN model elucidated the molecular basis of trait-tissue associations., Jia Peilin., 2020
Decoding whole-genome mutational signatures in 37 human pan-cancers by denoising sparse autoencoder neural network., Pei, Guangsheng, Hu, Ruifeng, Dai, Yulin, Zhao, Zhongming, Jia, Peilin., 2020
TSEA-DB: a trait tissue association map for human complex traits and diseases., Jia, Peilin, Dai, Yulin, Hu, Ruifeng, Pei, Guangsheng, Manuel, Astrid Marilyn, Zhao, Zhongming., 2020
Gene expression imputation and cell-type deconvolution in human brain with spatiotemporal precision and its implications for brain-related disorders., Jia Peilin., 2020
Mega-analysis of Odds Ratio: A Convergent Method for a Deep Understanding of the Genetic Evidence in Schizophrenia., Jia, Peilin, Chen, Xiangning, Xie, Wei, Kendler, Kenneth S, Zhao, Zhongming., 2019
deTS: tissue-specific enrichment analysis to decode tissue specificity., Pei, Guangsheng, Dai, Yulin, Zhao, Zhongming, Jia, Peilin., 2019
CNet: a

遗传学复杂疾病致病基因统计方法数学方法数据挖掘生物信息学算法工具疾病机制癌症体细胞突变癌症基因细胞影响深度学习个性化治疗癌症成因遗传研究组学脑疾病精神疾病退行性疾病认知障碍计算方法多组学数据遗传基础疾病相关性分析整合

贺雄雷 - 中山大学

石婷 - 上海交通大学

Area of Focus
酶 | 催化 | 机制 | 计算 | 生物学 | 生物信息学 | 分析 | 结构 | 功能 | 药物设计

郭景康 - 上海大学

Area of Focus
原子 | 核 | 物理 | 理论 | 计算 | 材料 | 数据挖掘 | 人工智能 | 生物学 | 考古 | 化学 | 模型 | 模拟 | 设计 | 数字化 | 分析 | 机器学习 | 细胞 | 文物 | 保护

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