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Yan Chaochao
Life Science
University of Chinese Academy of Sciences
Sichuan
Language: Chinese, English
Snake
Diversity
Evolution
Genomics
Phylogenetics
Adaptation
Biodiversity
Conservation
Ecology
Herpetology
Areas of Focus
- Snake Diversity and Evolution
Work Experience
- 2022-11 to Present - Chinese Academy of Sciences Chengdu Institute of Biology - Associate Researcher
- 2019-07 to 2022-11 - Chinese Academy of Sciences Chengdu Institute of Biology - Postdoctoral Researcher, Assistant Researcher
Academic Background & Achievements
- 2014-09 to 2019-06 PhD: Sichuan University
- 2011-09 to 2014-06 Master's: Sichuan University
- 2007-09 to 2011-06 Bachelor's: Central China Normal University
Publications
- Genomic Consequences of and Demographic Response to Pervasive Hybridization Over Time in Climate-Sensitive Pikas, 7th Author, 2023
- Genetic mapping and molecular mechanism behind color variation in the Asian vine snake, 7th Author, 2023
- Developmental regulation of conserved non-coding element evolution provides insights into limb loss in squamates, 4th Author, 2023
- Effects of climate change and anthropogenic activity on ranges of vertebrate species endemic to the Qinghai-Tibet Plateau over 40 years, 0th Author, 2023
- Temperature acclimation in hot-spring snakes and the convergence of cold response, 1st Author, 2022
- Genome Sequencing of Amomum tsao-ko Provides Novel Insight Into Its Volatile Component Biosynthesis, 2nd Author, 2022
- Genome of Laudakia sacra Provides New Insights into High-Altitude Adaptation of Ectotherms, 1st Author, 2022
- Chromosome-level de novo genome assembly and whole-genome resequencing of the threatened species Acanthochlamys bracteata (Velloziaceae) provide insights into alpine plant divergence in a biodiversity hotspot, 4th Author, 2022
- The structural and functional divergence of a neglected three-finger toxin subfamily in lethal elapids, 4th Author, 2022
- Genomic evidence reveals intraspecific divergence of the hot-spring snake (Thermophis baileyi), an endangered reptile endemic to the Qinghai-Tibet plateau, 1st Author, 2022
- MEANGS: an efficient seed-free tool for de novo assembling animal mitochondrial genome using whole genome NGS data, 2nd Author, 2022
- Sichuan hot-spring snakes imperiled: reason, situation, and protection, 2nd Author, 2022
- Age-related gene expression and DNA methylation changes in rhesus macaque, 4th Author, 2020
- Effects of aging on gene expression in blood of captive Tibetan macaques (Macaca thibetana) and comparisons with expression in humans, 1st Author, 2020
- Genetic and Functional Diversity of Pseudomonas aeruginosa in Patients With Chronic Obstructive Pulmonary Disease, 4th Author, 2020
- The Genome of Shaw's Sea Snake (Hydrophis curtus) Reveals Secondary Adaptation to Its Marine Environment, 8th Author, 2020
- Phenotypic and genetic characterization of Pseudomonas aeruginosa isolate COP2 from the lungs of COPD patients in China, 5th Author, 2019
- The draft genome sequence of forest musk deer (Moschus berezovskii), 5th Author, 2018
- Identification of Triplophysa species from the Qinghai-Tibetan Plateau (QTP) and its adjacent regions through DNA barcodes, 5th Author, 2017
- A novel mitochondrial genome of Arborophila and new insight into Arborophila evolutionary history, 1st Author, 2017
- Distinct patterns of simple sequence repeats and GC distribution in intragenic and intergenic regions of primate genomes, 2nd Author, 2016
- Identification of CR1 retroposons in Arborophila rufipectus and their application to Phasianidae phylogeny, 2nd Author, 2016
- The complete mitochondrial genome of Accipiter virgatus and evolutionary history of the pseudo-control regions in Falconiformes, 3rd Author, 2015
- Phylogenetic analyses of the harvest mouse, Micromys minutus (Rodentia: Muridae) based on the complete mitogenome sequences, 3rd Author, 2015
- Complete mitochondrial genome of hainan partridge, arborophila ardens (galliformes: phasianidae), 1st Author, 2014
Awards
- Patent (2021): A method for assembling animal mitochondrial genomes based on second-generation data, Patent No: CN112802554A
