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Guoqing Zhang
Life Science
University of Chinese Academy of Sciences
Shanghai
Language: Chinese, English
Computational Biology
Biomedical Big Data
Bioinformatics
Genomics
Data Analysis
Microbiome
Sars-Cov-2
Metagenomics
Epigenetics
Pharmacogenomics
Areas of Focus
- Computational Biology - Biomedical Big Data
Work Experience
- 2017-01~Present - Chinese Academy of Sciences, Shanghai Institute of Nutrition and Health - Deputy Director of Biomedical Big Data Center
- 2016-12~Present - Chinese Academy of Sciences, Shanghai Institute of Life Sciences - Deputy Director of Biomedical Big Data Center
- 2007-09~2016-12 - Shanghai Center for Bioinformation Technology - Head of Life Science Data Center
- 2006-07~2007-08 - Shanghai Center for Bioinformation Technology - Engineer at Life Science Data Center
Academic Background & Achievements
- 2003-09--2006-06 PhD in Biomedical Engineering: Huazhong University of Science and Technology
- 2000-09--2003-06 Master's in Biomedical Engineering: Huazhong University of Science and Technology
- 1996-09--2000-06 Bachelor's in Biochemistry: Central China Normal University
Publications
- Systematic Microbiome Dysbiosis Is Associated with IgA Nephropathy, 13th Author, 2023
- Multi-kingdom microbiota analyses identify bacterial-fungal interactions and biomarkers of colorectal cancer across cohorts, 11th Author, 2022
- PGG.SV: a whole-genome-sequencing-based structural variant resource and data analysis platform, 11th Author, 2022
- Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022, 11th Author, 2022
- Linking genomic and epidemiologic information to advance the study of COVID-19, 11th Author, 2022
- Mining of novel secondary metabolite biosynthetic gene clusters from acid mine drainage, 11th Author, 2022
- An interactive viral genome evolution network analysis system enabling rapid large-scale molecular tracing of SARS-CoV-2, 11th Author, 2022
- dbDEMC 3.0:Functional Exploration of Differentially Expressed miRNAs in Cancers of Human and Model Organisms, 11th Author, 2022
- Global cold-chain related SARS-CoV-2 transmission identified by pandemic-scale phylogenomics, 11th Author, 2022
- Coronavirus GenBrowser for monitoring the transmission and evolution of SARS-CoV-2, 11th Author, 2022
- TransCirc: an interactive database for translatable circular RNAs based on multi-omics evidence, 11th Author, 2021
- Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021, 11th Author, 2021
- Probiotics and fructo-oligosaccharide intervention modulate the microbiota-gut brain axis to improve autism spectrum reducing also the hyper-serotonergic state and the dopamine metabolism disorder, 6th Author, 2020
- PGG.Han: the Han Chinese genome database and analysis platform, 22nd Author, 2020
- EpiDISH web server: Epigenetic Dissection of Intra-Sample-Heterogeneity with online GUI, 8th Author, 2020
- GTDB: an integrated resource for glycosyltransferase sequences and annotations, 11th Author, 2020
- 数字植物：科学内涵、瓶颈及发展策略, 6th Author, 2020
- Knowledge graph embedding by Bias Vectors, 6th Author, 2019
- 生物医学大数据发展的新挑战与趋势, 1st Author, 2018
- 专题：生物医疗大数据——宏基因组大数据分析的质量控制流程规范, 6th Author, 2018
- SysFinder: A customized platform for search, comparison and assisted design of appropriate animal models based on systematic similarity, 2nd Author, 2017
- 建设微生物组大数据中心发挥长期科学影响, Not mentioned, 2017
- Web Resources for Pharmacogenomics, 11th Author, 2015
- Characterization of Full-Length Genomes of Hepatitis B Virus Quasispecies in Sera of Patients at Different Phases of Infection, 13th Author, 2015
- The optimization of running time for a maximum common substructure-based algorithm and its application in drug design, 11th Author, 2014
