Professor | Yanjie Chao | Asia Growth Partners

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Name	Yanjie Chao
Contact Information	yjchao@ips.ac.cn
Language ability	English, German, Chinese
Province	Shanghai

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Name

Yanjie Chao

Contact Information

yjchao@ips.ac.cn

Language ability

English, German, Chinese

Province

Shanghai

University/Lab Affiliation and Title	University of Chinese Academy of Sciences
Faculty	Life Sciences
Academic Background & Achievements	2008-12--2014-09 PhD: Max-Planck Institute & Humboldt University of Berlin, Germany
Work Experience	2016-08~2020-08 - Howard Hughes Medical Institute & Tufts University, USA - Postdoc 2014-09~2016-08 - University of Wuerzburg, Germany - Postdoc 2018-05-01-present - BMC Genomics - Associate Editor

University/Lab Affiliation and Title

University of Chinese Academy of Sciences

Faculty

Life Sciences

Academic Background & Achievements

2008-12--2014-09 PhD: Max-Planck Institute & Humboldt University of Berlin, Germany

Work Experience

2016-08~2020-08 - Howard Hughes Medical Institute & Tufts University, USA - Postdoc
2014-09~2016-08 - University of Wuerzburg, Germany - Postdoc
2018-05-01-present - BMC Genomics - Associate Editor

Areas of Focus	Intestinal Bacteria Mechanisms of Microbial Pathogenesis Non-coding RNA Gene Expression Regulation
Publications	Salmonella effector SopB reorganizes cytoskeletal vimentin to maintain replication vacuoles for efficient infection., Shuangshuang Zhao, Qiuping Xu, Yanqin Cui, Su Yao, Sihui Jin, Qian Zhang, Zeyu Wen, Haihua Ruan, Xin Liang, Yanjie Chao, Sitang Gong, Philippe Sansonetti, Ke Wei, Hong Tang, Yaming Jiu, 2023 RNase III-CLASH brings bacterial RNA networks into focus., Svensson, Sarah L, Chao, Yanjie, 2022 Impact of pseudouridylation, substrate fold, and degradosome organization on the endonuclease activity of RNase E., Islam, Md Saiful, Bandyra, Katarzyna J, Chao, Yanjie, Vogel, Jorg, Luisi, Ben F, 2021 The global emergence of a novel Streptococcus suis clade associated with human infections., Dong, Xingxing, Chao, Yanjie, Zhou, Yang, Zhou, Rui, Zhang, Wei, Fischetti, Vincent A, Wang, Xiaohong, Feng, Ye, Li, Jinquan, 2021 The conserved 3 ' UTR-derived small RNA NarS mediates mRNA crossregulation during nitrate respiration., Wang, Chuan, Chao, Yanjie, Matera, Gianluca, Gao, Qian, Vogel, Joerg, 2020 In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways., Chao, Yanjie, Li, Lei, Girodat, Dylan, Foerstner, Konrad U, Said, Nelly, Corcoran, Colin, Smiga, Michal, Papenfort, Kai, Reinhardt, Richard, Wieden, HansJoachim, Luisi, Ben F, Vogel, Joerg, 2017 A 3 ' UTR-Derived Small RNA Provides the Regulatory Noncoding Arm of the Inner Membrane Stress Response., Chao, Yanjie, Vogel, Joerg, 2016 Transcriptome-Wide Identification of Hfq-Associated RNAs in Brucella suis by Deep Sequencing., Saadeh, Bashir, Caswell, Clayton C, Chao, Yanjie, Berta, Philippe, Wattam, Alice Rebecca, Roop, R Martin, II, OCallaghana, David, 2016 Cross talk between ABC transporter mRNAs via a target mRNA-derived sponge of the GcvB small RNA., Miyakoshi, Masatoshi, Chao, Yanjie, Vogel, Joerg, 2015 Regulatory small RNAs from the 3 ' regions of bacterial mRNAs., Miyakoshi, Masatoshi, Chao, Yanjie, Vogel, Joerg, 2015 RNA-Mediated Regulation in Pathogenic Bacteria., Caldelari, Isabelle, Chao, Yanjie, Romby, Pascale, Vogel, Joerg, 2013 An atlas of Hfq-bound transcripts reveals 3 ' UTRs as a genomic reservoir of regulatory small RNAs., Chao, Yanjie, Papenfort, Kai, Reinhardt, Richard, Sharma, Cynthia M, Vogel, Joerg, 2012 The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium., Kroeger, Carsten, Dillon, Shane C, Cameron, Andrew D S, Papenfort, Kai, Sivasankaran, Sathesh K, Hokamp, Karsten, Chao, Yanjie, Sittka, Alexandra, Hebrard, Magali, Haendler, Kristian, Colgan, Aoife, Leekitcharoenphon, Pimlapas, Langridge, Gemma C, Lohan, Amanda J, Loftus, Brendan, Lucchini, Sacha, Ussery, David W, Dorman, Charles J, Thomson, Nicholas R, Vogel, Joerg, Hinton, Jay C D, 2012 CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III., Deltcheva, Elitza, Chylinski, Krzysztof, Sharma, Cynthia M, Gonzales, Karine, Chao, Yanjie, Pirzada, Zaid A, Eckert, Maria R, Vogel, Joerg, Charpentier, Emmanuelle, 2011 The role of Hfq in bacterial pathogens., Chao, Yanjie, Vogel, Joerg, 2010 Potential challenges to the Stop TB Plan for humans in China; cattle maintain M-bovis and M-tuberculosis., Chen, Yingyu, Chao, Yanjie, Deng, Quantao, Liu, Tao, Xiang, Jie, Chen, Jun, Zhou, Jinhai, Zhan, Zhihua, Kuang, Youji, Cai, Hong, Chen, Huanchun, Guo, Aizhen, 2009 Serological survey of bovine herpesvirus type 1 infection in China., B.F. Yan, Y.J. Chao, Z. Chen, K.G. Tian, C.B. Wang, X.M. Lin, H.C. Chen, A.Z. Guo, 2008

Areas of Focus

Intestinal Bacteria
Mechanisms of Microbial Pathogenesis
Non-coding RNA
Gene Expression Regulation

Publications

Salmonella effector SopB reorganizes cytoskeletal vimentin to maintain replication vacuoles for efficient infection., Shuangshuang Zhao, Qiuping Xu, Yanqin Cui, Su Yao, Sihui Jin, Qian Zhang, Zeyu Wen, Haihua Ruan, Xin Liang, Yanjie Chao, Sitang Gong, Philippe Sansonetti, Ke Wei, Hong Tang, Yaming Jiu, 2023
RNase III-CLASH brings bacterial RNA networks into focus., Svensson, Sarah L, Chao, Yanjie, 2022
Impact of pseudouridylation, substrate fold, and degradosome organization on the endonuclease activity of RNase E., Islam, Md Saiful, Bandyra, Katarzyna J, Chao, Yanjie, Vogel, Jorg, Luisi, Ben F, 2021
The global emergence of a novel Streptococcus suis clade associated with human infections., Dong, Xingxing, Chao, Yanjie, Zhou, Yang, Zhou, Rui, Zhang, Wei, Fischetti, Vincent A, Wang, Xiaohong, Feng, Ye, Li, Jinquan, 2021
The conserved 3 ' UTR-derived small RNA NarS mediates mRNA crossregulation during nitrate respiration., Wang, Chuan, Chao, Yanjie, Matera, Gianluca, Gao, Qian, Vogel, Joerg, 2020
In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways., Chao, Yanjie, Li, Lei, Girodat, Dylan, Foerstner, Konrad U, Said, Nelly, Corcoran, Colin, Smiga, Michal, Papenfort, Kai, Reinhardt, Richard, Wieden, HansJoachim, Luisi, Ben F, Vogel, Joerg, 2017
A 3 ' UTR-Derived Small RNA Provides the Regulatory Noncoding Arm of the Inner Membrane Stress Response., Chao, Yanjie, Vogel, Joerg, 2016
Transcriptome-Wide Identification of Hfq-Associated RNAs in Brucella suis by Deep Sequencing., Saadeh, Bashir, Caswell, Clayton C, Chao, Yanjie, Berta, Philippe, Wattam, Alice Rebecca, Roop, R Martin, II, OCallaghana, David, 2016
Cross talk between ABC transporter mRNAs via a target mRNA-derived sponge of the GcvB small RNA., Miyakoshi, Masatoshi, Chao, Yanjie, Vogel, Joerg, 2015
Regulatory small RNAs from the 3 ' regions of bacterial mRNAs., Miyakoshi, Masatoshi, Chao, Yanjie, Vogel, Joerg, 2015
RNA-Mediated Regulation in Pathogenic Bacteria., Caldelari, Isabelle, Chao, Yanjie, Romby, Pascale, Vogel, Joerg, 2013
An atlas of Hfq-bound transcripts reveals 3 ' UTRs as a genomic reservoir of regulatory small RNAs., Chao, Yanjie, Papenfort, Kai, Reinhardt, Richard, Sharma, Cynthia M, Vogel, Joerg, 2012
The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium., Kroeger, Carsten, Dillon, Shane C, Cameron, Andrew D S, Papenfort, Kai, Sivasankaran, Sathesh K, Hokamp, Karsten, Chao, Yanjie, Sittka, Alexandra, Hebrard, Magali, Haendler, Kristian, Colgan, Aoife, Leekitcharoenphon, Pimlapas, Langridge, Gemma C, Lohan, Amanda J, Loftus, Brendan, Lucchini, Sacha, Ussery, David W, Dorman, Charles J, Thomson, Nicholas R, Vogel, Joerg, Hinton, Jay C D, 2012
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III., Deltcheva, Elitza, Chylinski, Krzysztof, Sharma, Cynthia M, Gonzales, Karine, Chao, Yanjie, Pirzada, Zaid A, Eckert, Maria R, Vogel, Joerg, Charpentier, Emmanuelle, 2011
The role of Hfq in bacterial pathogens., Chao, Yanjie, Vogel, Joerg, 2010
Potential challenges to the Stop TB Plan for humans in China; cattle maintain M-bovis and M-tuberculosis., Chen, Yingyu, Chao, Yanjie, Deng, Quantao, Liu, Tao, Xiang, Jie, Chen, Jun, Zhou, Jinhai, Zhan, Zhihua, Kuang, Youji, Cai, Hong, Chen, Huanchun, Guo, Aizhen, 2009
Serological survey of bovine herpesvirus type 1 infection in China., B.F. Yan, Y.J. Chao, Z. Chen, K.G. Tian, C.B. Wang, X.M. Lin, H.C. Chen, A.Z. Guo, 2008

Bacteria Pathogenesis Microbiology Rna Gene Regulation Infection Non-Coding Rna Intestinal Microbial Mechanisms

Hua Yuan - Shanghai Normal University

Chenguang Zhu - Shanghai University

Jing-Hua Chen - Zhejiang University

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