Professor | Jiantao Shi | Asia Growth Partners

Name	Jiantao Shi
Contact Information	jtshi@sibcb.ac.cn
Language ability	Chinese, English
Province	Shanghai

Name

Jiantao Shi

Contact Information

jtshi@sibcb.ac.cn

Language ability

Chinese, English

Province

Shanghai

University/Lab Affiliation and Title	University of Chinese Academy of Sciences
Faculty	Medical School
Academic Background & Achievements	2003-09--2010-06 PhD: Shanghai Institute of Life Sciences, Chinese Academy of Sciences 1999-09--2003-06 Bachelor's: Huazhong University of Science and Technology
Work Experience	2020-01~Present - Chinese Academy of Sciences, Center for Excellence in Molecular Cell Science - Researcher 2014-08~2019-07 - Dana-Farber Cancer Institute - Research Associate 2012-06~2014-08 - Harvard T.H. Chan School of Public Health - Research Fellow 2010-06~2012-05 - Illumina (Shanghai) - Bioinformatics Support Scientist
Awards	Best Paper of the Year (2010): Ruijin Hospital, First Prize

University/Lab Affiliation and Title

University of Chinese Academy of Sciences

Faculty

Medical School

Academic Background & Achievements

2003-09--2010-06 PhD: Shanghai Institute of Life Sciences, Chinese Academy of Sciences
1999-09--2003-06 Bachelor's: Huazhong University of Science and Technology

Work Experience

2020-01~Present - Chinese Academy of Sciences, Center for Excellence in Molecular Cell Science - Researcher
2014-08~2019-07 - Dana-Farber Cancer Institute - Research Associate
2012-06~2014-08 - Harvard T.H. Chan School of Public Health - Research Fellow
2010-06~2012-05 - Illumina (Shanghai) - Bioinformatics Support Scientist

Awards

Best Paper of the Year (2010): Ruijin Hospital, First Prize

Areas of Focus	Epigenetics DNA Methylation Cancer Diagnosis Single-cell Transcriptome Data Mining
Publications	mHapTk: a comprehensive toolkit for the analysis of DNA methylation haplotypes, Ding, Yi, Cai, Kangwen, Liu, Leiqin, Zhang, Zhiqiang, Zheng, Xiaoqi, Shi, Jiantao, 2022 Identification of Master Regulators Driving Disease Progression, Relapse, and Drug Resistance in Lung Adenocarcinoma, Qiong Xu, Qiongfang Cha, Hui Qin, Bin Liu, Xueling Wu, Jiantao Shi, 2022 The DNA methylation haplotype (mHap) format and mHapTools, Zhang, Zhiqiang, Dan, Yuhao, Xu, Yaochen, Zhang, Jiarui, Zheng, Xiaoqi, Shi, Jiantao, 2021 Epigenetic restriction of extraembryonic lineages mirrors the somatic transition to cancer, Smith, Zachary D, Shi, Jiantao, Gu, Hongcang, Donaghey, Julie, Clement, Kendell, Cacchiarelli, Davide, Gnirke, Andreas, Michor, Franziska, Meissner, Alexander, 2017 The Mutational Landscape of Circulating Tumor Cells in Multiple Myeloma, Mishima, Yuji, Paiva, Bruno, Shi, Jiantao, Park, Jihye, Manier, Salomon, Takagi, Satoshi, Massoud, Mira, PerillaGlen, Adriana, Aljawai, Yosra, Huynh, Daisy, Roccaro, Aldo M, Sacco, Antonio, Capelletti, Marzia, Detappe, Alexandre, Alignani, Diego, Anderson, Kenneth C, Munshi, Nikhil C, Prosper, Felipe, Lohr, Jens G, Ha, Gavin, Freeman, Samuel S, Van Allen, Eliezer M, Adalsteinsson, Viktor A, Michor, Franziska, San Miguel, Jesus F, Ghobrial, Irene M, 2017 Exome sequencing reveals recurrent germline variants in patients with familial Waldenstrom's macroglobulinemia, Shi Jiantao, 2016 AMD, an Automated Motif Discovery Tool Using Stepwise Refinement of Gapped Consensuses, Shi, Jiantao, Yang, Wentao, Chen, Mingjie, Du, Yanzhi, Zhang, Ji, Wang, Kankan, 2011 PML/RAR alpha Targets Promoter Regions Containing PU.1 Consensus and RARE Half Sites in Acute Promyelocytic Leukemia, Wang, Kankan, Wang, Ping, Shi, Jiantao, Zhu, Xuehua, He, Miaomiao, Jia, Xiaohong, Yang, Xianwen, Qiu, Fei, Jin, Wen, Qian, Maoxiang, Fang, Hai, Mi, Jianqing, Yang, Xuzhi, Xiao, Huasheng, Minden, Mark, Du, Yanzhi, Chen, Zhu, Zhang, Ji, 2010

Areas of Focus

Epigenetics
DNA Methylation
Cancer Diagnosis
Single-cell Transcriptome Data Mining

Publications

mHapTk: a comprehensive toolkit for the analysis of DNA methylation haplotypes, Ding, Yi, Cai, Kangwen, Liu, Leiqin, Zhang, Zhiqiang, Zheng, Xiaoqi, Shi, Jiantao, 2022
Identification of Master Regulators Driving Disease Progression, Relapse, and Drug Resistance in Lung Adenocarcinoma, Qiong Xu, Qiongfang Cha, Hui Qin, Bin Liu, Xueling Wu, Jiantao Shi, 2022
The DNA methylation haplotype (mHap) format and mHapTools, Zhang, Zhiqiang, Dan, Yuhao, Xu, Yaochen, Zhang, Jiarui, Zheng, Xiaoqi, Shi, Jiantao, 2021
Epigenetic restriction of extraembryonic lineages mirrors the somatic transition to cancer, Smith, Zachary D, Shi, Jiantao, Gu, Hongcang, Donaghey, Julie, Clement, Kendell, Cacchiarelli, Davide, Gnirke, Andreas, Michor, Franziska, Meissner, Alexander, 2017
The Mutational Landscape of Circulating Tumor Cells in Multiple Myeloma, Mishima, Yuji, Paiva, Bruno, Shi, Jiantao, Park, Jihye, Manier, Salomon, Takagi, Satoshi, Massoud, Mira, PerillaGlen, Adriana, Aljawai, Yosra, Huynh, Daisy, Roccaro, Aldo M, Sacco, Antonio, Capelletti, Marzia, Detappe, Alexandre, Alignani, Diego, Anderson, Kenneth C, Munshi, Nikhil C, Prosper, Felipe, Lohr, Jens G, Ha, Gavin, Freeman, Samuel S, Van Allen, Eliezer M, Adalsteinsson, Viktor A, Michor, Franziska, San Miguel, Jesus F, Ghobrial, Irene M, 2017
Exome sequencing reveals recurrent germline variants in patients with familial Waldenstrom's macroglobulinemia, Shi Jiantao, 2016
AMD, an Automated Motif Discovery Tool Using Stepwise Refinement of Gapped Consensuses, Shi, Jiantao, Yang, Wentao, Chen, Mingjie, Du, Yanzhi, Zhang, Ji, Wang, Kankan, 2011
PML/RAR alpha Targets Promoter Regions Containing PU.1 Consensus and RARE Half Sites in Acute Promyelocytic Leukemia, Wang, Kankan, Wang, Ping, Shi, Jiantao, Zhu, Xuehua, He, Miaomiao, Jia, Xiaohong, Yang, Xianwen, Qiu, Fei, Jin, Wen, Qian, Maoxiang, Fang, Hai, Mi, Jianqing, Yang, Xuzhi, Xiao, Huasheng, Minden, Mark, Du, Yanzhi, Chen, Zhu, Zhang, Ji, 2010

Epigenetics Dna Methylation Cancer Diagnosis Single-Cell Transcriptome Data Mining Genomics Bioinformatics Molecular Biology

Shenying Fang - Southern University of Science and Technology

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Kou Hao - Wuhan University

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