Areas of Focus
- 表观遗传学
- DNA甲基化
- 肿瘤诊断
- 单细胞转录组数据挖掘
Work Experience
- 2020-01~现在 - 中国科学院分子细胞科学卓越创新中心 - 研究员
- 2014-08~2019-07 - Dana-Farber癌症研究所 - 研究助理
- 2012-06~2014-08 - 哈佛大学T.H. Chan公共卫生学院 - 研究员
- 2010-06~2012-05 - Illumina (上海) - 生物信息学支持科学家
Academic Background & Achievements
- 2003-09--2010-06 博士: 中国科学院上海生命科学研究院
- 1999-09--2003-06 学士: 华中科技大学
Publications
- mHapTk: a comprehensive toolkit for the analysis of DNA methylation haplotypes, Ding, Yi, Cai, Kangwen, Liu, Leiqin, Zhang, Zhiqiang, Zheng, Xiaoqi, Shi, Jiantao, 2022
- Identification of Master Regulators Driving Disease Progression, Relapse, and Drug Resistance in Lung Adenocarcinoma, Qiong Xu, Qiongfang Cha, Hui Qin, Bin Liu, Xueling Wu, Jiantao Shi, 2022
- The DNA methylation haplotype (mHap) format and mHapTools, Zhang, Zhiqiang, Dan, Yuhao, Xu, Yaochen, Zhang, Jiarui, Zheng, Xiaoqi, Shi, Jiantao, 2021
- Epigenetic restriction of extraembryonic lineages mirrors the somatic transition to cancer, Smith, Zachary D, Shi, Jiantao, Gu, Hongcang, Donaghey, Julie, Clement, Kendell, Cacchiarelli, Davide, Gnirke, Andreas, Michor, Franziska, Meissner, Alexander, 2017
- The Mutational Landscape of Circulating Tumor Cells in Multiple Myeloma, Mishima, Yuji, Paiva, Bruno, Shi, Jiantao, Park, Jihye, Manier, Salomon, Takagi, Satoshi, Massoud, Mira, PerillaGlen, Adriana, Aljawai, Yosra, Huynh, Daisy, Roccaro, Aldo M, Sacco, Antonio, Capelletti, Marzia, Detappe, Alexandre, Alignani, Diego, Anderson, Kenneth C, Munshi, Nikhil C, Prosper, Felipe, Lohr, Jens G, Ha, Gavin, Freeman, Samuel S, Van Allen, Eliezer M, Adalsteinsson, Viktor A, Michor, Franziska, San Miguel, Jesus F, Ghobrial, Irene M, 2017
- Exome sequencing reveals recurrent germline variants in patients with familial Waldenstrom's macroglobulinemia, Shi Jiantao, 2016
- AMD, an Automated Motif Discovery Tool Using Stepwise Refinement of Gapped Consensuses, Shi, Jiantao, Yang, Wentao, Chen, Mingjie, Du, Yanzhi, Zhang, Ji, Wang, Kankan, 2011
- PML/RAR alpha Targets Promoter Regions Containing PU.1 Consensus and RARE Half Sites in Acute Promyelocytic Leukemia, Wang, Kankan, Wang, Ping, Shi, Jiantao, Zhu, Xuehua, He, Miaomiao, Jia, Xiaohong, Yang, Xianwen, Qiu, Fei, Jin, Wen, Qian, Maoxiang, Fang, Hai, Mi, Jianqing, Yang, Xuzhi, Xiao, Huasheng, Minden, Mark, Du, Yanzhi, Chen, Zhu, Zhang, Ji, 2010
Awards
- 年度最佳论文 (2010): 瑞金医院, 一等奖
