2000-2004: B.Sc. in Life Science, National Taiwan University
2004-2012: Ph.D. in Plant Biology, National Taiwan University
2012: Postdoctoral Fellow, National Taiwan University
2013-2016: Postdoctoral Fellow, Fudan University
2016: Young Associate Researcher, Fudan University
2018: Promoted to Associate Researcher, Fudan University
2020: Visiting Scholar, University of Pennsylvania
2023: Researcher, Inner Mongolia University Assistance Project
2012: Postdoctoral Fellow, National Taiwan University
2013-2016: Postdoctoral Fellow, Fudan University
2016: Young Associate Researcher, Fudan University
2018: Promoted to Associate Researcher, Fudan University
2020: Visiting Scholar, University of Pennsylvania
2023: Researcher, Inner Mongolia University Assistance Project
2016: Fosun Distinguished Teaching Award
2019: Second Prize in the National University Life Sciences Micro-Lecture Teaching Competition
Research
Phylogenetics Systematic and Evolutionary Botany Bioinformatics Genomics Molecular Genetics Biodiversity Science Plant Stress Resistance Morphological Evolution Genomic Duplications Ancient Geological Climate and Geography
Phylogenomics insights into gene evolution, rapid species diversification, and morphological innovation of the apple tribe (Maleae, Rosaceae), Zhang L, Morales-Briones DF, Li Y, Zhang G, Zhang T, Huang C-H, Guo P, Zhang K, Wang Y, Wang H, Shang F-D, Ma H, 2023
PXL1 and SERKs act as receptor–coreceptor complexes for the CLE19 peptide to regulate pollen development, Yu Y, Song W, Zhai N, Zhang S, Wang J, Wang S, Liu W, Huang C-H, Ma H, Chai J, Chang F, 2023
Adaptive evolution of the enigmatic Takakia now facing climate change in Tibet, Hu R, Li X, Hu Y, Zhang R, Lv Q, Zhang M, Sheng X, Zhao F, Chen Z, Ding Y, Yuan H, Wu X, Xing S, Yan X, Bao F, Wan P, Xiao L, Wang X, Xiao W, Decker EL, van Gessel N, Renault H, Wiedemann G, Horst NA, Haas FB, Wilhelmsson PKI, Ullrich KK, Neumann E, Lv B, Liang C, Du H, Lu H, Gao Q, Cheng Z, You H, Xin P, Chu J, Huang C-H, Liu Y, Dong S, Zhang L, Chen F, Deng L, Duan F, Zhao W, Li K, Li Z, Li X, Cui H, Zhang YE, Ma C, Zhu R, Jia Y, Wang M, Hasebe M, Fu J, Goffinet B, Ma H, Rensing SA, Reski R, He Y, 2023
Nuclear phylogeny and insights into whole-genome duplications and reproductive development of Solanaceae plants, Huang J, Xu W, Zhai J, Hu Y, Guo J, Zhang C, Zhao Y, Zhang L, Martine C, Ma H, Huang C-H, 2023
Phylogenomic analyses of Camellia support reticulate evolution among major clades, Zan T, He Y-T, Zhang M, Yonezawa T, Ma H, Zhao Q-M, Kuo W-Y, Zhang W-J, Huang C-H, 2023
Structural insights into partner selection for MYB and bHLH transcription factor complexes, Wang B, Luo Q, Li Y, Du K, Wu Z, Li T, Shen W-H, Huang C-H, Gan J, Dong A, 2022
Phylogenomic analyses of Alismatales shed light into adaptations to aquatic environments, Chen L-Y, Lu B, Morales-Briones DF, Moody ML, Liu F, Hu G-W, Huang C-H, Chen J-M, Wang Q-F, 2022
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere, Liu B-B, Ren C, Kwak M, Hodel RGJ, Xu C, He J, Zhou W-B, Huang C-H, Ma H, Qian G-Z, Hong D-Y, Wen J, 2022
A well-supported nuclear phylogeny of Poaceae and implications for the evolution of C4 photosynthesis, Huang W, Zhang L, Columbus JT, Hu Y, Zhao Y, Tang L, Guo Z, Chen W, McKain M, Bartlett M, Huang C-H, Li D-Z, Ge S, Ma H, 2022
Phylotranscriptomics resolves the phylogeny of Pooideae and uncovers factors for their adaptive evolution, Zhang L, Zhu X, Zhao Y, Guo J, Zhang T, Huang W, Huang J, Hu Y, Huang C-H, Ma H, 2022
Factors influencing the rate of species diversification in flowering plants, Guo W, Huang C-H, 2021
Analysis of paralogs in target enrichment data pinpoints multiple ancient polyploidy events in Alchemilla s.l. (Rosaceae), Morales-Briones DF, Gehrke B, Huang C-H, Liston A, Ma H, Marx HE, Tank DC, Yang Y, 2021
Significance of AtMTM1 and AtMTM2 for mitochondrial MnSOD activation in Arabidopsis, Hu S-H, Lin S-F, Huang Y-C, Huang C-H, Kuo W-Y, Jinn T-L, 2021
Nuclear phylotranscriptomics and phylogenomics support numerous polyploidization events and hypotheses for the evolution of rhizobial nitrogen-fixing symbiosis in Fabaceae, Zhao Y, Zhang R, Jiang K, Qi J, Hu Y, Guo J, Zhu R, Zhang T, Egan AN, Yi T-S, Huang C-H, Ma H, 2021
Phylotranscriptomic insight into Asteraceae diversity, polyploidy, and morphological innovation, Zhang C, Huang C-H, Liu M, Hu Y, Panero JL, Luebert F, Gao T, Ma H, 2021
Phylotranscriptomics in Cucurbitaceae reveal multiple whole-genome duplications and key morphological and molecular innovations, Guo J, Xu W, Hu Y, Huang J, Zhao Y, Zhang L, Huang C-H, Ma H, 2020
Recurrent genome duplication events likely contributed to both the ancient and recent rise of ferns, Huang C-H, Qi X, Chen D, Qi J, Ma H, 2020
Phylogenomic insights into deep phylogeny of angiosperms based on broad nuclear gene sampling, Yang L, Su D, Chang X, Foster CSP, Sun L, Huang C-H, Zhou X, Zeng L, Ma H, Zhong B, 2020
Asterid phylogenomics/phylotranscriptomics uncover morphological evolutionary histories and support phylogenetic placement for numerous whole-genome duplications, Zhang C, Zhang T, Luebert F, Xiang Y, Huang C-H, Hu Y, Rees M, Frohlich MW, Qi J, Weigend M, Ma H, 2020
Whole-genome duplications in pear and apple, Li H, Huang C-H, Ma H, 2019
A well-resolved fern nuclear phylogeny reveals the evolution history of numerous transcription factor families, Qi X, Kuo L-Y, Guo C, Li H, Li Z, Qi J, Wang L, Hu Y, Xiang J, Zhang C, Guo J, Huang C-H, Ma H, 2018
Evolution of Rosaceae fruit types based on nuclear phylogeny in the context of geological times and genome duplication, Xiang YZ, Huang C-H, Yi H, Wen J, Li S, Yi T, Chen H, Xiang J, Hong M, 2017
Multiple polyploidization events across Asteraceae with two nested events in the early history revealed by nuclear phylogenomics, Huang C-H, Zhang C, Liu M, Hu Y, Gao T, Qi J, Ma H, 2016
Resolution of Brassicaceae phylogeny using nuclear genes uncovers nested radiations and supports convergent morphological evolution, Huang C-H, Sun R, Hu Y, Zeng L, Zhang N, Cai L, Zhang Q, Koch MA, Al-Shehbaz I, Edger PP, Pires JC, Tan DY, Zhong Y, Ma H, 2016
Research on Systematic Evolutionary Relationships of Cruciferous Plants' Family Level Using Low-Copy Nuclear Genes, Zhang Z, Huang C-H, Qi J, 2016
