Professor | Yan Lu | Asia Growth Partners

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Name	Yan Lu
Contact Information	lueyan@fudan.edu.cn
Language ability	Chinese, English
Province	Shanghai

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Name

Yan Lu

Contact Information

lueyan@fudan.edu.cn

Language ability

Chinese, English

Province

Shanghai

University/Lab Affiliation and Title	Fudan University
Faculty	Life Sciences
Academic Background & Achievements	2006-2012: PhD in Genetics, Fudan University Selected for Shanghai Youth Science and Technology Talent 'Sailing Plan' Published multiple SCI research papers in international journals
Work Experience	2012-2020: Assistant Researcher, Shanghai Institute of Life Sciences, Chinese Academy of Sciences 2020-present: Associate Researcher, School of Life Sciences, Fudan University
Awards	Selected for Shanghai Youth Science and Technology Talent 'Sailing Plan'

University/Lab Affiliation and Title

Fudan University

Faculty

Life Sciences

Academic Background & Achievements

2006-2012: PhD in Genetics, Fudan University
Selected for Shanghai Youth Science and Technology Talent 'Sailing Plan'
Published multiple SCI research papers in international journals

Work Experience

2012-2020: Assistant Researcher, Shanghai Institute of Life Sciences, Chinese Academy of Sciences
2020-present: Associate Researcher, School of Life Sciences, Fudan University

Awards

Selected for Shanghai Youth Science and Technology Talent 'Sailing Plan'

Areas of Focus	Genetic diversity and co-evolution of pathogens, vectors, and hosts Genetic structure and adaptive evolution of populations Genetic basis and pangenome research of infectious diseases Bioinformatics databases and online analysis platforms
Publications	A pangenome reference of 36 Chinese populations, Yang Gao, Xiaofei Yang, Hao Chen, Xinjiang Tan, Zhaoqing Yang, Lian Deng, Baonan Wang, Shuang Kong, Songyang Li, Yuhang Cui, Chang Lei, Yimin Wang, Yuwen Pan, Sen Ma, Xiaohan Zhao, Yingbing Shi, Ziyi Yang, Dongdong Wu, Shaoyuan Wu, Xingming Zhao, Bingyin Shi, Li Jin, Zhibin Hu, Chinese Pangenome Consortium, Yan Lu, Jiayou Chu, Kai Ye, Shuhua Xu, 2023 A protocol for applying low-coverage whole-genome sequencing data in structural variation studies, Qi Liu, Bo Xie, Yang Gao, Shuhua Xu, Yan Lu, 2023 Mapping Structural Variations in Haemaphysalis longicornis and Rhipicephalus microplus Reveals Vector-Pathogen Adaptation, Qi Liu, Ke Yang, Bo Xie, Yang Gao, Shuhua Xu, Yan Lu, 2023 Comparative genomic and transcriptomic analyses reveal the impacts of genetic admixture in Kazaks, Uyghurs, and Huis, Yuwen Pan, Jia Wen, Zhilin Ning, Yuan Yuan, Xubing Liu, Yajun Yang, Yaqun Guan, Yan Lu, Dolikun Mamatyusupu, Shuhua Xu, 2023 Genome-wide DNA methylation landscape of four Chinese populations and epigenetic variation linked to Tibetan high-altitude adaptation, Zeshan Lin, Yan Lu, Guoliang Yu, Huajing Teng, Bao Wang, Yajun Yang, Qinglan Li, Zhongsheng Sun, Shuhua Xu, Wen Wang, Peng Tian, 2023 A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching, Fang Luo, Wenbin Yang, Mingbo Yin, Xiaojin Mo, Yuhong Pang, Chengsong Sun, Bingkuan Zhu, Wei Zhang, Cun Yi, Zhidan Li, Jipeng Wang, Bin Xu, Zheng Feng, Yangyi Huang, Yan Lu, Wei Hu, 2022 Genomic diversity and post-admixture adaptation in the Uyghurs, Yuwen Pan, Chao Zhang, Yan Lu, Zhilin Ning, Dongsheng Lu, Yang Gao, Xiaohan Zhao, Yajun Yang, Yaqun Guan, Dolikun Mamatyusupu, Shuhua Xu, 2021 Y-LineageTracker: a high-throughput analysis framework for Y-chromosomal next-generation sequencing data, Hao Chen, Yan Lu, Dongsheng Lu, Shuhua Xu, 2021 PGG.SNV: Understanding the evolutionary and medical implications of human single nucleotide variations in diverse populations, Chao Zhang, Yang Gao, Zhilin Ning, Yan Lu, Xiaoxi Zhang, Jiaojiao Liu, Bo Xie, Zhe Xue, Xiaoji Wang, Kai Yuan, Xueling Ge, Yuwen Pan, Chang Liu, Lei Tian, Yuchen Wang, Dongsheng Lu, Boon-Peng Hoh, Shuhua Xu, 2019 Reconstruction of Y-chromosome phylogeny reveals two neolithic expansions of Tibeto-Burman populations, Lingxiang Wang, Yan Lu, Chao Zhang, LanHai Wei, Shi Yan, Yunzhi Huang, Chuanchao Wang, Swapan Mallick, Shaoqing Wen, Li Jin, Shuhua Xu, Hui Li, 2018 Differentiated demographic histories and local adaptations between Sherpas and Tibetans, Chao Zhang, Yan Lu, Qidi Feng, Xiaoji Wang, Haiyi Lou, Jiaojiao Liu, Zhilin Ning, Kai Yuan, Yuchen Wang, Ying Zhou, Lian Deng, Lijun Liu, Yajun Yang, Shilin Li, Lifeng Ma, Zhiying Zhang, Li Jin, Bing Su, Longli Kang, Shuhua Xu, 2017 Genetic history of Xinjiang’s Uyghurs suggests Bronze Age multiple-way contacts in Eurasia, Qidi Feng, Yan Lu, Xumin Ni, Kai Yuan, Yajun Yang, Xiong Yang, Chang Liu, Haiyi Lou, Zhilin Ning, Yuchen Wang, Dongsheng Lu, Chao Zhang, Ying Zhou, Meng Shi, Lei Tian, Xiaoji Wang, Xi Zhang, Jing Li, Asifullah Khan, Yaqun Guan, Kun Tang, Sijia Wang, Shuhua Xu, 2017 A 3.4-kb Copy-Number Deletion near EPAS1 Is Significantly Enriched in High-Altitude Tibetans but Absent from the Denisovan Sequence, Haiyi Lou, Yan Lu, Dongsheng Lu, Ruiqing Fu, Xiaoji Wang, Qidi Feng, Sijie Wu, Yajun Yang, Shilin Li, Longli Kang, Yaqun Guan, Boon-Peng Hoh, Yeun-Jun Chung, Li Jin, Bing Su, Shuhua Xu, 2015 Genetic evidence for the multiple origins of Pinghua Chinese, Yan Lu, Shangling Pan, Shuming Qin, Zhengdong Qin, Chuanchao Wang, Ruijing Gan, Hui Li, the Genographic Consortium, 2013 High diversity and no significant selection signal of human ADH1B gene in Tibet, Yan Lu, Longli Kang, Kang Hu, Chuanchao Wang, Xiaoji Sun, Feng Chen, Judith R Kidd, Kenneth K Kidd, Hui Li, 2012 Mitochondrial Origin of the Matrilocal Mosuo People in China, Yan Lu, ChuanChao Wang, Zhendong Qin, Bo Wen, Sara E Farina, Li Jin, Hui Li, the Genographic Consortium, 2011 Y-chromosome O3 Haplogroup Diversity in Sino-Tibetan Populations Reveals Two Migration Routes into the Eastern Himalayas, Longli Kang, Yan Lu, Chuanchao Wang, Kang Hu, Feng Chen, Kai Liu, Shilin Li, Li Jin, Hui Li, the Genographic Consortium, 2011

Areas of Focus

Genetic diversity and co-evolution of pathogens, vectors, and hosts
Genetic structure and adaptive evolution of populations
Genetic basis and pangenome research of infectious diseases
Bioinformatics databases and online analysis platforms

Publications

A pangenome reference of 36 Chinese populations, Yang Gao, Xiaofei Yang, Hao Chen, Xinjiang Tan, Zhaoqing Yang, Lian Deng, Baonan Wang, Shuang Kong, Songyang Li, Yuhang Cui, Chang Lei, Yimin Wang, Yuwen Pan, Sen Ma, Xiaohan Zhao, Yingbing Shi, Ziyi Yang, Dongdong Wu, Shaoyuan Wu, Xingming Zhao, Bingyin Shi, Li Jin, Zhibin Hu, Chinese Pangenome Consortium, Yan Lu, Jiayou Chu, Kai Ye, Shuhua Xu, 2023
A protocol for applying low-coverage whole-genome sequencing data in structural variation studies, Qi Liu, Bo Xie, Yang Gao, Shuhua Xu, Yan Lu, 2023
Mapping Structural Variations in Haemaphysalis longicornis and Rhipicephalus microplus Reveals Vector-Pathogen Adaptation, Qi Liu, Ke Yang, Bo Xie, Yang Gao, Shuhua Xu, Yan Lu, 2023
Comparative genomic and transcriptomic analyses reveal the impacts of genetic admixture in Kazaks, Uyghurs, and Huis, Yuwen Pan, Jia Wen, Zhilin Ning, Yuan Yuan, Xubing Liu, Yajun Yang, Yaqun Guan, Yan Lu, Dolikun Mamatyusupu, Shuhua Xu, 2023
Genome-wide DNA methylation landscape of four Chinese populations and epigenetic variation linked to Tibetan high-altitude adaptation, Zeshan Lin, Yan Lu, Guoliang Yu, Huajing Teng, Bao Wang, Yajun Yang, Qinglan Li, Zhongsheng Sun, Shuhua Xu, Wen Wang, Peng Tian, 2023
A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching, Fang Luo, Wenbin Yang, Mingbo Yin, Xiaojin Mo, Yuhong Pang, Chengsong Sun, Bingkuan Zhu, Wei Zhang, Cun Yi, Zhidan Li, Jipeng Wang, Bin Xu, Zheng Feng, Yangyi Huang, Yan Lu, Wei Hu, 2022
Genomic diversity and post-admixture adaptation in the Uyghurs, Yuwen Pan, Chao Zhang, Yan Lu, Zhilin Ning, Dongsheng Lu, Yang Gao, Xiaohan Zhao, Yajun Yang, Yaqun Guan, Dolikun Mamatyusupu, Shuhua Xu, 2021
Y-LineageTracker: a high-throughput analysis framework for Y-chromosomal next-generation sequencing data, Hao Chen, Yan Lu, Dongsheng Lu, Shuhua Xu, 2021
PGG.SNV: Understanding the evolutionary and medical implications of human single nucleotide variations in diverse populations, Chao Zhang, Yang Gao, Zhilin Ning, Yan Lu, Xiaoxi Zhang, Jiaojiao Liu, Bo Xie, Zhe Xue, Xiaoji Wang, Kai Yuan, Xueling Ge, Yuwen Pan, Chang Liu, Lei Tian, Yuchen Wang, Dongsheng Lu, Boon-Peng Hoh, Shuhua Xu, 2019
Reconstruction of Y-chromosome phylogeny reveals two neolithic expansions of Tibeto-Burman populations, Lingxiang Wang, Yan Lu, Chao Zhang, LanHai Wei, Shi Yan, Yunzhi Huang, Chuanchao Wang, Swapan Mallick, Shaoqing Wen, Li Jin, Shuhua Xu, Hui Li, 2018
Differentiated demographic histories and local adaptations between Sherpas and Tibetans, Chao Zhang, Yan Lu, Qidi Feng, Xiaoji Wang, Haiyi Lou, Jiaojiao Liu, Zhilin Ning, Kai Yuan, Yuchen Wang, Ying Zhou, Lian Deng, Lijun Liu, Yajun Yang, Shilin Li, Lifeng Ma, Zhiying Zhang, Li Jin, Bing Su, Longli Kang, Shuhua Xu, 2017
Genetic history of Xinjiang’s Uyghurs suggests Bronze Age multiple-way contacts in Eurasia, Qidi Feng, Yan Lu, Xumin Ni, Kai Yuan, Yajun Yang, Xiong Yang, Chang Liu, Haiyi Lou, Zhilin Ning, Yuchen Wang, Dongsheng Lu, Chao Zhang, Ying Zhou, Meng Shi, Lei Tian, Xiaoji Wang, Xi Zhang, Jing Li, Asifullah Khan, Yaqun Guan, Kun Tang, Sijia Wang, Shuhua Xu, 2017
A 3.4-kb Copy-Number Deletion near EPAS1 Is Significantly Enriched in High-Altitude Tibetans but Absent from the Denisovan Sequence, Haiyi Lou, Yan Lu, Dongsheng Lu, Ruiqing Fu, Xiaoji Wang, Qidi Feng, Sijie Wu, Yajun Yang, Shilin Li, Longli Kang, Yaqun Guan, Boon-Peng Hoh, Yeun-Jun Chung, Li Jin, Bing Su, Shuhua Xu, 2015
Genetic evidence for the multiple origins of Pinghua Chinese, Yan Lu, Shangling Pan, Shuming Qin, Zhengdong Qin, Chuanchao Wang, Ruijing Gan, Hui Li, the Genographic Consortium, 2013
High diversity and no significant selection signal of human ADH1B gene in Tibet, Yan Lu, Longli Kang, Kang Hu, Chuanchao Wang, Xiaoji Sun, Feng Chen, Judith R Kidd, Kenneth K Kidd, Hui Li, 2012
Mitochondrial Origin of the Matrilocal Mosuo People in China, Yan Lu, ChuanChao Wang, Zhendong Qin, Bo Wen, Sara E Farina, Li Jin, Hui Li, the Genographic Consortium, 2011
Y-chromosome O3 Haplogroup Diversity in Sino-Tibetan Populations Reveals Two Migration Routes into the Eastern Himalayas, Longli Kang, Yan Lu, Chuanchao Wang, Kang Hu, Feng Chen, Kai Liu, Shilin Li, Li Jin, Hui Li, the Genographic Consortium, 2011

Genetic Diversity Co-Evolution Pathogens Vectors Hosts Genetic Structure Adaptive Evolution Infectious Diseases Pangenome Bioinformatics

Yalong Guo - University of Chinese Academy of Sciences

Haipeng Li - University of Chinese Academy of Sciences

Bing Su - University of Chinese Academy of Sciences

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