Professor | Dong Wang | Asia Growth Partners

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Name	Dong Wang
Contact Information	wangdong79@smu.edu.cn
Language ability	Chinese, English
Province	Guangdong

Upload Avatar (500 x 500)

Name

Dong Wang

Contact Information

wangdong79@smu.edu.cn

Language ability

Chinese, English

Province

Guangdong

University/Lab Affiliation and Title	Southern Medical University
Faculty	Basic Medical Sciences
Awards	Honorable Mention (2020): Advisor for the American College Student Mathematical Modeling Competition (MCM/ICM)

University/Lab Affiliation and Title

Southern Medical University

Faculty

Basic Medical Sciences

Awards

Honorable Mention (2020): Advisor for the American College Student Mathematical Modeling Competition (MCM/ICM)

Areas of Focus	Development and stem cell computational systems biology
Publications	RNADisease v4.0: an updated resource of RNA-associated diseases, providing RNA-disease analysis, enrichment and prediction., Jia Chen, Jiahao Lin, Yongfei Hu, Meijun Ye, Linhui Yao, Le Wu, Wenhai Zhang, Meiyi Wang, Tingting Deng, Feng Guo, Yan Huang, Bofeng Zhu, Dong Wang, 2022 Single-cell architecture and functional requirement of alternative splicing during hematopoietic stem cell formation., Fang Wang, Puwen Tan, Pengcheng Zhang, Yue Ren, Jie Zhou, Yunqiao Li, Siyuan Hou, Shuaili Li, Linlin Zhang, Yanni Ma, Chaojie Wang, Wanbo Tang, Xiaoshuang Wang, Yue Huo, Yongfei Hu, Tianyu Cui, Chao Niu, Dong Wang, Bing Liu, Yu Lan, Jia Yu, 2022 RNALocate v2.0: an updated resource for RNA subcellular localization with increased coverage and annotation., Tianyu Cui, Yiying Dou, Puwen Tan, Zhen Ni, Tianyuan Liu, DuoLin Wang, Yan Huang, Kaican Cai, Xiaoyang Zhao, Dong Xu, Hao Lin, Dong Wang, 2022 RNAInter v4.0: RNA interactome repository with redefined confidence scoring system and improved accessibility., Juanjuan Kang, Qiang Tang, Jun He, Le Li, Nianling Yang, Shuiyan Yu, Mengyao Wang, Yuchen Zhang, Jiahao Lin, Tianyu Cui, Yongfei Hu, Puwen Tan, Jun Cheng, Hailong Zheng, Dong Wang, Xi Su, Wei Chen, Yan Huang, 2022 ViRBase v3.0: a virus and host ncRNA-associated interaction repository with increased coverage and annotation., Jun Cheng, Yunqing Lin, Linfu Xu, Kechen Chen, Qi Li, Kaixin Xu, Lin Ning, Juanjuan Kang, Tianyu Cui, Yan Huang, Xiaoyang Zhao, Dong Wang, Yanhui Li, Xi Su, Bin Yang, 2022 RNAPhaSep: a resource of RNAs undergoing phase separation., Haibo Zhu, Hao Fu, Tianyu Cui, Lin Ning, Huaguo Shao, Yehan Guo, Yanting Ke, Jiayi Zheng, Hongyan Lin, XinWu, Guanghao Liu, Jun He, Xin Han, Wenlin Li, Xiaoyang Zhao, Huasong Lu, Dong Wang, Kongfa Hu, Xiaopei Shen, 2022 Hematopoietic stem cell heterogeneity is linked to the initiation and therapeutic response of myeloproliferative neoplasms., Jingyuan Tong, Ting Sun, Shihui Ma, Yanhong Zhao, Mankai Ju, Yuchen Gao, Ping Zhu, Puwen Tan, Rongfeng Fu, Anqi Zhang, Ding Wang, Di Wang, Zhijian Xiao, Jiaxi Zhou, Renchi Yang, Stephen Loughran, Juan Li, Anthony R. Green, Emery H. Bresnick, Dong Wang, Tao Cheng, Lei Zhang, Lihong Shi, 2021 MNDR v3.0: mammal ncRNA–disease repository with increased coverage and annotation., Lin Ning, Tianyu Cui, Boyang Zheng, Nuo Wang, Jiaxin Luo, Beilei Yang, Mengze Du, Jun Cheng, Yiying Dou, Dong Wang, 2021 Cellinker: a platform of ligand-receptor interactions for intercellular communication analysis., Yang Zhang, Tianyuan Liu, Jing Wang, Bohao Zou, Le Li, Linhui Yao, Kechen Chen, Lin Ning, Bingyi Wu, Xiaoyang Zhao, Dong Wang, 2021 CellCall: integrating paired ligand-receptor and transcription factor activities for cell-cell communication., Yang Zhang, Tianyuan Liu, Xuesong Hu, Mei Wang, Jing Wang, Bohao Zou, Puwen Tan, Tianyu Cui, Yiying Dou, Lin Ning, Yan huang, Shuan Rao, Dong Wang, Xiaoyang Zhao, 2021 cncRNAdb: a manually curated resource of experimentally supported RNAs with both protein-coding and noncoding function., Yan Huang, Jing Wang, Yue Zhao, Huafeng Wang, Tianyuan Liu, Yuhe Li, Tianyu Cui, Weiyi Li, Yige Feng, Jiaxin Luo, Jiaqi Gong, Lin Ning, Yong Zhang, Dong Wang, Yang Zhang, 2021 DM3Loc: Multi-label mRNA Subcellular Localization Prediction and Analysis Based on Multi-head Self-attention Mechanism., Duolin Wang, Zhaoyue Zhang, Yuexu Jiang, Ziting Mao, Dong Wang, Hao Lin, Dong Xu, 2021 hnRNPLL controls pluripotency exit of embryonic stem cells by modulating alternative splicing of Tbx3 and Bptf., Xue Wang, Changyun Ping, Puwen Tan, Chenguang Sun, Guang Liu, Tao Liu, Shuchun Yang, Yanmin Si, Lijun Zhao, Yongfei Hu, Yuyan Jia, Xiaoshuang Wang, Meili Zhang, Fang Wang, Dong Wang, Jia Yu, Yanni Ma and Yue Huang, 2021 Design powerful predictor for mRNA subcellular location prediction in Homo sapiens., ZhaoYue Zhang, YuHe Yang, Hui Ding, Dong Wang, Wei Chen, Hao Lin, 2021 RNAInter in 2020: RNA interactome repository with increased coverage and annotation., Yunqing Lin, Tianyuan Liu, Tianyu Cui, Zhao Wang, Yuncong Zhang, Puwen Tan, Yan Huang, Jia Yu, Dong Wang, 2020 microRNA arm-imbalance in part from complementary targets mediated decay promotes gastric cancer progression., Zhengyi Zhang, Jingnan Pi, Dongling Zou, Xiaoshuang Wang, Jiayue Xu, Shan Yu, Ting Zhang, Feng Li, Xianxie Zhang, Hualu Zhao, Fang Wang, Dong Wang, Yanni Ma, Jia Yu, 2019 RIscoper: a tool for RNA-RNA interaction extraction from the literature., Yang Zhang, Tianyuan Liu, Liqun Chen, Jinxurong Yang, Jiayi Yin, Yuncong Zhang, Zhixi Yun, Hao Xu, Lin Ning, Fengbiao Guo, Yongshuai Jiang, Hao Lin, Dong Wang, Yan Huang, Jian Huang, 2019 MNDR v2.0: an updated resource of ncRNA–disease associations in mammals., Tianyu Cui, Lin Zhang, Yan Huang, Ying Yi, Puwen Tan, Yue Zhao, Yongfei Hu, Liyan Xu, Enmin Li, Dong Wang, 2018 Transcriptomic insights into temporal expression pattern of autophagy genes during monocytic and granulocytic differentiation., Yan Huang, Puwen Tan, Xiaoshuang Wang, Ying Yi, Yongfei Hu, Dong Wang, Fang Wang, 2018 KSRP specifies monocytic and granulocytic differentiation through regulating miR-129 biogenesis and RUNX1 expression., Hongmei Zhao, Xiaoshuang Wang, Ping Yi, Yanmin Si, Puwen Tan, Jinrong He, Shan Yu, Yue Ren, Yanni Ma, Junwu Zhang, Dong Wang, Fang Wang, Jia Yu, 2017 RNALocate: a resource for RNA subcellular localizations., Ting Zhang, Puwen Tan, Liqiang Wang, Nana Jin, Yana Li, Lin Zhang, Huan Yang, Zhenyu Hu, Lining Zhang, Chunyu Hu, Chunhua Li, Kun Qian, Changjian Zhang, Yan Huang, Kongning Li, Hao Lin, Dong Wang, 2017 RAID v2.0: an updated resource of RNA-associated interactions across organisms., Ying Yi, Yue Zhao, Chunhua Li, Lin Zhang, Huiying Huang, Yana Li, Lanlan Liu, Ping Hou, Tianyu Cui, Puwen Tan, Yongfei Hu, Ting Zhang, Yan Huang, Xiaobo Li, Jia Yu, Dong Wang, 2017 Single-cell RNA sequencing highlights transcription activity of autophagy-related genes during haematopoietic stem cell formation in mouse embryos., Yongfei Hu, Yan Huang, Ying Yi, Hongwei Wang, Bing Liu, Jia Yu, Dong Wang, 2017 ViRBase: a resource for virus-host ncRNA-associated interactions., Yanhui Li, Changliang Wang, Zhengqiang Miao, Xiaoman Bi, Deng Wu, Nana Jin, Liqiang Wang, Hao Wu, Kun Qian, Chunhua Li, Ting Zhang, Chunrui Zhang, Ying Yi, Hongyan Lai, Yongfei Hu, Lixin Cheng, Kwong-Sak Leung, Xiaobo Li, Fengmin Zhang, Kongning Li, Xia Li, Dong Wang, 2015 ncRDeathDB: a comprehensive bioinformatics resource for deciphering network organization of the ncRNA-mediated cell death system., Deng Wu, Yan Huang, Juanjuan Kang, Kongning Li, Xiaoman Bi, Ting Zhang, Nana Jin, Yongfei Hu, Puwen Tan, Lu Zhang, Ying Yi, Wenjun Shen, Jian Huang, Xiaobo Li, Xia Li, Jianzhen Xu, Dong Wang, 2015 Connect the dots: a systems level approach for analyzing the miRNA-mediated cell death network., Yifei Li, Liwei Zhuang, Yuting Wang, Yongfei Hu, Yun Wu, Dong Wang, Jianzhen Xu, 2013

Areas of Focus

Development and stem cell computational systems biology

Publications

RNADisease v4.0: an updated resource of RNA-associated diseases, providing RNA-disease analysis, enrichment and prediction., Jia Chen, Jiahao Lin, Yongfei Hu, Meijun Ye, Linhui Yao, Le Wu, Wenhai Zhang, Meiyi Wang, Tingting Deng, Feng Guo, Yan Huang, Bofeng Zhu, Dong Wang, 2022
Single-cell architecture and functional requirement of alternative splicing during hematopoietic stem cell formation., Fang Wang, Puwen Tan, Pengcheng Zhang, Yue Ren, Jie Zhou, Yunqiao Li, Siyuan Hou, Shuaili Li, Linlin Zhang, Yanni Ma, Chaojie Wang, Wanbo Tang, Xiaoshuang Wang, Yue Huo, Yongfei Hu, Tianyu Cui, Chao Niu, Dong Wang, Bing Liu, Yu Lan, Jia Yu, 2022
RNALocate v2.0: an updated resource for RNA subcellular localization with increased coverage and annotation., Tianyu Cui, Yiying Dou, Puwen Tan, Zhen Ni, Tianyuan Liu, DuoLin Wang, Yan Huang, Kaican Cai, Xiaoyang Zhao, Dong Xu, Hao Lin, Dong Wang, 2022
RNAInter v4.0: RNA interactome repository with redefined confidence scoring system and improved accessibility., Juanjuan Kang, Qiang Tang, Jun He, Le Li, Nianling Yang, Shuiyan Yu, Mengyao Wang, Yuchen Zhang, Jiahao Lin, Tianyu Cui, Yongfei Hu, Puwen Tan, Jun Cheng, Hailong Zheng, Dong Wang, Xi Su, Wei Chen, Yan Huang, 2022
ViRBase v3.0: a virus and host ncRNA-associated interaction repository with increased coverage and annotation., Jun Cheng, Yunqing Lin, Linfu Xu, Kechen Chen, Qi Li, Kaixin Xu, Lin Ning, Juanjuan Kang, Tianyu Cui, Yan Huang, Xiaoyang Zhao, Dong Wang, Yanhui Li, Xi Su, Bin Yang, 2022
RNAPhaSep: a resource of RNAs undergoing phase separation., Haibo Zhu, Hao Fu, Tianyu Cui, Lin Ning, Huaguo Shao, Yehan Guo, Yanting Ke, Jiayi Zheng, Hongyan Lin, XinWu, Guanghao Liu, Jun He, Xin Han, Wenlin Li, Xiaoyang Zhao, Huasong Lu, Dong Wang, Kongfa Hu, Xiaopei Shen, 2022
Hematopoietic stem cell heterogeneity is linked to the initiation and therapeutic response of myeloproliferative neoplasms., Jingyuan Tong, Ting Sun, Shihui Ma, Yanhong Zhao, Mankai Ju, Yuchen Gao, Ping Zhu, Puwen Tan, Rongfeng Fu, Anqi Zhang, Ding Wang, Di Wang, Zhijian Xiao, Jiaxi Zhou, Renchi Yang, Stephen Loughran, Juan Li, Anthony R. Green, Emery H. Bresnick, Dong Wang, Tao Cheng, Lei Zhang, Lihong Shi, 2021
MNDR v3.0: mammal ncRNA–disease repository with increased coverage and annotation., Lin Ning, Tianyu Cui, Boyang Zheng, Nuo Wang, Jiaxin Luo, Beilei Yang, Mengze Du, Jun Cheng, Yiying Dou, Dong Wang, 2021
Cellinker: a platform of ligand-receptor interactions for intercellular communication analysis., Yang Zhang, Tianyuan Liu, Jing Wang, Bohao Zou, Le Li, Linhui Yao, Kechen Chen, Lin Ning, Bingyi Wu, Xiaoyang Zhao, Dong Wang, 2021
CellCall: integrating paired ligand-receptor and transcription factor activities for cell-cell communication., Yang Zhang, Tianyuan Liu, Xuesong Hu, Mei Wang, Jing Wang, Bohao Zou, Puwen Tan, Tianyu Cui, Yiying Dou, Lin Ning, Yan huang, Shuan Rao, Dong Wang, Xiaoyang Zhao, 2021
cncRNAdb: a manually curated resource of experimentally supported RNAs with both protein-coding and noncoding function., Yan Huang, Jing Wang, Yue Zhao, Huafeng Wang, Tianyuan Liu, Yuhe Li, Tianyu Cui, Weiyi Li, Yige Feng, Jiaxin Luo, Jiaqi Gong, Lin Ning, Yong Zhang, Dong Wang, Yang Zhang, 2021
DM3Loc: Multi-label mRNA Subcellular Localization Prediction and Analysis Based on Multi-head Self-attention Mechanism., Duolin Wang, Zhaoyue Zhang, Yuexu Jiang, Ziting Mao, Dong Wang, Hao Lin, Dong Xu, 2021
hnRNPLL controls pluripotency exit of embryonic stem cells by modulating alternative splicing of Tbx3 and Bptf., Xue Wang, Changyun Ping, Puwen Tan, Chenguang Sun, Guang Liu, Tao Liu, Shuchun Yang, Yanmin Si, Lijun Zhao, Yongfei Hu, Yuyan Jia, Xiaoshuang Wang, Meili Zhang, Fang Wang, Dong Wang, Jia Yu, Yanni Ma and Yue Huang, 2021
Design powerful predictor for mRNA subcellular location prediction in Homo sapiens., ZhaoYue Zhang, YuHe Yang, Hui Ding, Dong Wang, Wei Chen, Hao Lin, 2021
RNAInter in 2020: RNA interactome repository with increased coverage and annotation., Yunqing Lin, Tianyuan Liu, Tianyu Cui, Zhao Wang, Yuncong Zhang, Puwen Tan, Yan Huang, Jia Yu, Dong Wang, 2020
microRNA arm-imbalance in part from complementary targets mediated decay promotes gastric cancer progression., Zhengyi Zhang, Jingnan Pi, Dongling Zou, Xiaoshuang Wang, Jiayue Xu, Shan Yu, Ting Zhang, Feng Li, Xianxie Zhang, Hualu Zhao, Fang Wang, Dong Wang, Yanni Ma, Jia Yu, 2019
RIscoper: a tool for RNA-RNA interaction extraction from the literature., Yang Zhang, Tianyuan Liu, Liqun Chen, Jinxurong Yang, Jiayi Yin, Yuncong Zhang, Zhixi Yun, Hao Xu, Lin Ning, Fengbiao Guo, Yongshuai Jiang, Hao Lin, Dong Wang, Yan Huang, Jian Huang, 2019
MNDR v2.0: an updated resource of ncRNA–disease associations in mammals., Tianyu Cui, Lin Zhang, Yan Huang, Ying Yi, Puwen Tan, Yue Zhao, Yongfei Hu, Liyan Xu, Enmin Li, Dong Wang, 2018
Transcriptomic insights into temporal expression pattern of autophagy genes during monocytic and granulocytic differentiation., Yan Huang, Puwen Tan, Xiaoshuang Wang, Ying Yi, Yongfei Hu, Dong Wang, Fang Wang, 2018
KSRP specifies monocytic and granulocytic differentiation through regulating miR-129 biogenesis and RUNX1 expression., Hongmei Zhao, Xiaoshuang Wang, Ping Yi, Yanmin Si, Puwen Tan, Jinrong He, Shan Yu, Yue Ren, Yanni Ma, Junwu Zhang, Dong Wang, Fang Wang, Jia Yu, 2017
RNALocate: a resource for RNA subcellular localizations., Ting Zhang, Puwen Tan, Liqiang Wang, Nana Jin, Yana Li, Lin Zhang, Huan Yang, Zhenyu Hu, Lining Zhang, Chunyu Hu, Chunhua Li, Kun Qian, Changjian Zhang, Yan Huang, Kongning Li, Hao Lin, Dong Wang, 2017
RAID v2.0: an updated resource of RNA-associated interactions across organisms., Ying Yi, Yue Zhao, Chunhua Li, Lin Zhang, Huiying Huang, Yana Li, Lanlan Liu, Ping Hou, Tianyu Cui, Puwen Tan, Yongfei Hu, Ting Zhang, Yan Huang, Xiaobo Li, Jia Yu, Dong Wang, 2017
Single-cell RNA sequencing highlights transcription activity of autophagy-related genes during haematopoietic stem cell formation in mouse embryos., Yongfei Hu, Yan Huang, Ying Yi, Hongwei Wang, Bing Liu, Jia Yu, Dong Wang, 2017
ViRBase: a resource for virus-host ncRNA-associated interactions., Yanhui Li, Changliang Wang, Zhengqiang Miao, Xiaoman Bi, Deng Wu, Nana Jin, Liqiang Wang, Hao Wu, Kun Qian, Chunhua Li, Ting Zhang, Chunrui Zhang, Ying Yi, Hongyan Lai, Yongfei Hu, Lixin Cheng, Kwong-Sak Leung, Xiaobo Li, Fengmin Zhang, Kongning Li, Xia Li, Dong Wang, 2015
ncRDeathDB: a comprehensive bioinformatics resource for deciphering network organization of the ncRNA-mediated cell death system., Deng Wu, Yan Huang, Juanjuan Kang, Kongning Li, Xiaoman Bi, Ting Zhang, Nana Jin, Yongfei Hu, Puwen Tan, Lu Zhang, Ying Yi, Wenjun Shen, Jian Huang, Xiaobo Li, Xia Li, Jianzhen Xu, Dong Wang, 2015
Connect the dots: a systems level approach for analyzing the miRNA-mediated cell death network., Yifei Li, Liwei Zhuang, Yuting Wang, Yongfei Hu, Yun Wu, Dong Wang, Jianzhen Xu, 2013

Computational Biology Stem Cells Rna Metabolism Hematopoiesis Big Data Analysis Systems Biology Bioinformatics Rna-Disease Analysis Rna Localization Rna Interactome

Qinghua Cui - Peking University

Hua-Jun Wu - Peking University

Chen Li - Zhejiang University

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