Professor | Su-Hua Shi | Asia Growth Partners

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Name	Su-Hua Shi
Contact Information	Issssh@mail.sysu.edu.cn
Language ability	Chinese, English
Province	Guangdong

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Name

Su-Hua Shi

Contact Information

Issssh@mail.sysu.edu.cn

Language ability

Chinese, English

Province

Guangdong

University/Lab Affiliation and Title	Sun Yat-Sen University
Faculty	Life Sciences
Academic Background & Achievements	1978.3-1982.1 Bachelor of Science in Biology: Jiangxi University 1983.9-1986.7 Master of Science in Botany: Sun Yat-sen University, Supervisor: Zhang Hongda 1987.9-1990.12 PhD in Botany (Plant Molecular Systematics): Sun Yat-sen University, Supervisor: Zhang Hongda Published over 130 SCI papers, some in Nature, Molecular Biology and Evolution, PLoS Genetics, etc. 2011 National Natural Science Second Prize 2002 and 2008 Ministry of Education Natural Science First Prize 1998 National Outstanding Youth Fund 2001 Qiu Shi Outstanding Young Scholar Award 2010 Ding Ying Science and Technology Award 2017 Corresponding Member of the American Botanical Society
Work Experience	1982.2-1983.9 Jiangxi Agricultural University, Department of Animal Husbandry and Veterinary Medicine, Assistant Lecturer 1986.7-1987.9 South China Botanical Garden, Chinese Academy of Sciences, Research Intern 1990.12-1992.11 Sun Yat-sen University, Department of Biology, Lecturer 1992.11-1995.12 Sun Yat-sen University, Department of Biology, Associate Professor 1995.12-present Sun Yat-sen University, School of Life Sciences, Professor, Doctoral Supervisor (since 1998) 1996.3-1997.3 Colorado State University, Department of Biology, Visiting Professor 2000.4-2000.7 Yeungnam University, Department of Biology, Visiting Professor 2000.9-2001.1 Harvard University, Herbarium, Visiting Professor 2003.12-2004.4 University of Chicago, Department of Ecology and Evolution, Visiting Professor
Awards	2011: National Natural Science Second Prize 2002: Ministry of Education Natural Science First Prize 2008: Ministry of Education Natural Science First Prize 1998: National Outstanding Youth Fund 2001: Qiu Shi Outstanding Young Scholar Award 2010: Ding Ying Science and Technology Award 2017: Corresponding Member of the American Botanical Society

University/Lab Affiliation and Title

Sun Yat-Sen University

Faculty

Life Sciences

Academic Background & Achievements

1978.3-1982.1 Bachelor of Science in Biology: Jiangxi University
1983.9-1986.7 Master of Science in Botany: Sun Yat-sen University, Supervisor: Zhang Hongda
1987.9-1990.12 PhD in Botany (Plant Molecular Systematics): Sun Yat-sen University, Supervisor: Zhang Hongda
Published over 130 SCI papers, some in Nature, Molecular Biology and Evolution, PLoS Genetics, etc.
2011 National Natural Science Second Prize
2002 and 2008 Ministry of Education Natural Science First Prize
1998 National Outstanding Youth Fund
2001 Qiu Shi Outstanding Young Scholar Award
2010 Ding Ying Science and Technology Award
2017 Corresponding Member of the American Botanical Society

Work Experience

1982.2-1983.9 Jiangxi Agricultural University, Department of Animal Husbandry and Veterinary Medicine, Assistant Lecturer
1986.7-1987.9 South China Botanical Garden, Chinese Academy of Sciences, Research Intern
1990.12-1992.11 Sun Yat-sen University, Department of Biology, Lecturer
1992.11-1995.12 Sun Yat-sen University, Department of Biology, Associate Professor
1995.12-present Sun Yat-sen University, School of Life Sciences, Professor, Doctoral Supervisor (since 1998)
1996.3-1997.3 Colorado State University, Department of Biology, Visiting Professor
2000.4-2000.7 Yeungnam University, Department of Biology, Visiting Professor
2000.9-2001.1 Harvard University, Herbarium, Visiting Professor
2003.12-2004.4 University of Chicago, Department of Ecology and Evolution, Visiting Professor

Awards

2011: National Natural Science Second Prize
2002: Ministry of Education Natural Science First Prize
2008: Ministry of Education Natural Science First Prize
1998: National Outstanding Youth Fund
2001: Qiu Shi Outstanding Young Scholar Award
2010: Ding Ying Science and Technology Award
2017: Corresponding Member of the American Botanical Society

Areas of Focus	Plant Evolution and Ecological Genomics Biogeography
Publications	Phylogenetics of Lythraceae sensu lato: a preliminary analysis based on chloroplast rbc L gene, psa A-ycf 3 spacer, and nuclear rDNA internal transcribed spacer (ITS) sequences., Huang Y., S. Shi., 2002 A case for conservation., Wu C-I., S. Shi, Y. Zhang., 2004 Molecular phylogenetic analysis of mangroves: independent evolutionary origins of vivipary and salt secretion., Shi S., Y. Huang, K. Zeng, F. Ten, H. He, J. Huang, Y. Fu., 2005 The accumulation of deleterious mutations in the rice genomes: A hypothesis on the cost of domestication., Lu J., T. Tang, H. Tang, J. Huang, S. Shi, C-I. Wu., 2006 Genomic variation in rice: Genesis of highly polymorphic linkage blocks during domestication., Tang T., J. Lu, J. Huang, J. He, S. R. McCouch, Y. Shen, Z. Kai, M. D. Purugganan, S. Shi, C-I. Wu., 2006 Population Genetics of Speciation in Nonmodel Organisms: I. Ancestral polymorphism in Mangroves., Zhou R., K. Zeng, W. Wu, X. Chen, Z. Yang, S. Shi, C-I. Wu., 2007 Population genetics in non-model organisms: II. Natural selection in marginal habitats revealed by deep sequencing on dual platforms., Zhou R., S. Ling, W. Zhao, N. Osada, S. Chen, M. Zhang, Z. He, H. Bao, C. Zhong, B. Zhang, X. Lu, D. Turissini, N. C. Duke, J. Lu, S. Shi, C-I. Wu., 2011 Two evolutionary histories in the genome of rice: the roles of domestication genes., He Z., W. Zhai, H. Wen, T. Tang, Y. Wang, X. Lu, AJ. Greenberg, RR. Hudson, C-I. Wu, S. Shi., 2011 Genetic discontinuities in a dominant mangrove Rhizophora apiculata (Rhizophoraceae) in the Indo-Malesian region., Guo Z., Y. Huang, Y. Chen, N. C. Duke, C. Zhong., S. Shi., 2016 Genome-wide convergence during evolution of mangroves from woody plants., Xu S., Z. He, Z. Guo, Z. Zhang, J. G. Wyckoff, A. Greenberg, C-I. Wu, S. Shi., 2017 Can genomic data alone tell us whether speciation happened with gene flow?, Yang M., Z. He, S. Shi, C-I. Wu ., 2017 The emergence of the hyper-invasive vine, Mikania micrantha (Asteraceae), via admixture and founder events inferred from population transcriptomics., Yang M., Z. He, Y. Huang, L. Lu, Y. Yan, L. Hong, H. Shen, Y. Liu, Q. Guo, L. Jiang, Y. Zhang, A. J. Greenberg, R. Zhou, X. Ge, C-I. Wu, S. Shi., 2017 The origin, diversification and adaptation of a major mangrove clade (Rhizophoreae) revealed by whole genome sequencing., Xu S., Z. He, Z. Zhang, Z. Guo, W. Guo, H. Lyu, J. Li, M. Yang, Z. Du, Y. Huang, R. Zhou, C. Zhong, D. E. Boufford, M. Lerdau, C-I. Wu, N. C. Duke, The International Mangrove Consortium, S. Shi., 2017 Extremely low genetic diversity across mangrove taxa reflects past sea level changes and hints at poor future responses., Guo Z., X. Li, Z. He, Y. Yang, W. Wang, C. Zhong, A. Greenberg, C-I. Wu, N. C. Duke, S. Shi., 2018 Convergent adaptive evolution in marginal environments: unloading transposable elements as a common strategy among mangrove genomes., Lyu H., Z. He, C-I. Wu, S. Shi., 2018 Speciation with gene flow via cycles of isolation and migration: Insights from multiple mangrove taxa., He Z., X. Li, M. Yang, X. Wang, C. Zhong, N. C. Duke, C-I. Wu, S. Shi., 2019

Areas of Focus

Plant Evolution and Ecological Genomics
Biogeography

Publications

Phylogenetics of Lythraceae sensu lato: a preliminary analysis based on chloroplast rbc L gene, psa A-ycf 3 spacer, and nuclear rDNA internal transcribed spacer (ITS) sequences., Huang Y., S. Shi*., 2002
A case for conservation., Wu C-I., S. Shi, Y. Zhang., 2004
Molecular phylogenetic analysis of mangroves: independent evolutionary origins of vivipary and salt secretion., Shi S.*, Y. Huang, K. Zeng, F. Ten, H. He, J. Huang, Y. Fu*., 2005
The accumulation of deleterious mutations in the rice genomes: A hypothesis on the cost of domestication., Lu J., T. Tang, H. Tang, J. Huang, S. Shi*, C-I. Wu*., 2006
Genomic variation in rice: Genesis of highly polymorphic linkage blocks during domestication., Tang T., J. Lu, J. Huang, J. He, S. R. McCouch, Y. Shen, Z. Kai, M. D. Purugganan, S. Shi*, C-I. Wu*., 2006
Population Genetics of Speciation in Nonmodel Organisms: I. Ancestral polymorphism in Mangroves., Zhou R., K. Zeng, W. Wu, X. Chen, Z. Yang, S. Shi*, C-I. Wu., 2007
Population genetics in non-model organisms: II. Natural selection in marginal habitats revealed by deep sequencing on dual platforms., Zhou R., S. Ling, W. Zhao, N. Osada, S. Chen, M. Zhang, Z. He, H. Bao, C. Zhong, B. Zhang, X. Lu, D. Turissini, N. C. Duke, J. Lu, S. Shi*, C-I. Wu*., 2011
Two evolutionary histories in the genome of rice: the roles of domestication genes., He Z., W. Zhai, H. Wen, T. Tang, Y. Wang, X. Lu, AJ. Greenberg, RR. Hudson, C-I. Wu*, S. Shi*., 2011
Genetic discontinuities in a dominant mangrove Rhizophora apiculata (Rhizophoraceae) in the Indo-Malesian region., Guo Z., Y. Huang, Y. Chen, N. C. Duke, C. Zhong., S. Shi*., 2016
Genome-wide convergence during evolution of mangroves from woody plants., Xu S., Z. He, Z. Guo, Z. Zhang, J. G. Wyckoff, A. Greenberg, C-I. Wu, S. Shi*., 2017
Can genomic data alone tell us whether speciation happened with gene flow?, Yang M., Z. He, S. Shi*, C-I. Wu *., 2017
The emergence of the hyper-invasive vine, Mikania micrantha (Asteraceae), via admixture and founder events inferred from population transcriptomics., Yang M., Z. He, Y. Huang, L. Lu, Y. Yan, L. Hong, H. Shen, Y. Liu, Q. Guo, L. Jiang, Y. Zhang, A. J. Greenberg, R. Zhou, X. Ge, C-I. Wu, S. Shi*., 2017
The origin, diversification and adaptation of a major mangrove clade (Rhizophoreae) revealed by whole genome sequencing., Xu S., Z. He, Z. Zhang, Z. Guo, W. Guo, H. Lyu, J. Li, M. Yang, Z. Du, Y. Huang, R. Zhou, C. Zhong, D. E. Boufford, M. Lerdau, C-I. Wu, N. C. Duke, The International Mangrove Consortium, S. Shi*., 2017
Extremely low genetic diversity across mangrove taxa reflects past sea level changes and hints at poor future responses., Guo Z., X. Li, Z. He, Y. Yang, W. Wang, C. Zhong, A. Greenberg, C-I. Wu, N. C. Duke, S. Shi*., 2018
Convergent adaptive evolution in marginal environments: unloading transposable elements as a common strategy among mangrove genomes., Lyu H., Z. He, C-I. Wu, S. Shi*., 2018
Speciation with gene flow via cycles of isolation and migration: Insights from multiple mangrove taxa., He Z., X. Li, M. Yang, X. Wang, C. Zhong, N. C. Duke, C-I. Wu*, S. Shi*., 2019

Adaptive Evolution Speciation Plant Genome Evolution Convergent Evolution Phylogeography Mangrove Genomics Ecology Biodiversity Evolutionary Biology

Zhenghuan Wang - East China Normal University

Ke Zhang - Zhejiang University

Yalong Guo - University of Chinese Academy of Sciences

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