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Jun Yan
Neuroscience Chinese academy of sciences
Chinese Academy of Sciences
Shanghai
Language: Chinese, English
Neural Networks
Gene Regulation
Biological Networks
Computational Biology
Bioinformatics
Neuroscience
Brain Function
Circadian Rhythms
Systems Biology
Artificial Intelligence
Areas of Focus
- Large-scale neural network analysis
- Gene regulatory network analysis
Work Experience
- 2003-2006 - University of Alaska Fairbanks, USA - Postdoctoral Research
- 2006-2009 - Institute of Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences - Researcher, Research Group Leader
- 2009-2015 - Max Planck Society, Germany - Young Scientist Group Leader
- 2015-present - Institute of Neuroscience, Chinese Academy of Sciences - Researcher, Research Group Leader
Academic Background & Achievements
- 1994-1998 Bachelor of Science: Fudan University, Shanghai
- 1998-2003 Doctor of Science: New York University, USA
Publications
- Single-neuron analysis of dendrites and axons reveals the network organization in mouse prefrontal cortex., Gao, L., Liu, S., Wang, Y., Wu, Q., Gou, L., Yan, J., 2023
- Cholecystokinin neurons in mouse suprachiasmatic nucleus regulate the robustness of circadian clock., Xie, L., Xiong, Y., Ma, D., Shi, K., Chen, J., Yang, Q., Yan, J., 2023
- Single-neuron projectome of mouse prefrontal cortex., Gao, L., Liu, S., Gou, L., Hu, Y., Liu, Y., Deng, L., Ma, D., Wang, H., Yang, Q., Chen, Z., Liu, D., Qiu, S., Wang, X., Wang, D., Wang, X., Ren, B., Liu, Q., Chen, T., Shi, X., Yao, H., Xu, C., Li, C., Sun, Y., Li, A., Luo, Q., Gong, H., Xu, N., Yan, J., 2022
- The landscape of regulatory genes in brain-wide neuronal phenotypes of a vertebrate brain., Zhang, H., Wang, H., Shen, X., Jia, X., Yu, S., Qiu, X., Wang, Y., Du, J., Yan, J., He, J., 2021
- Single-cell in vivo imaging of cellular circadian oscillators in zebrafish., Wang, H., Yang, Z., Li, X., Huang, D., Yu, S., He, J., Li, Y., Yan, J., 2020
- Spatiotemporal single-cell analysis of gene expression in the mouse suprachiasmatic nucleus., Wen, S., Ma, D., Zhao, M., Xie, L., Wu, Q., Gou, L., Zhu, C., Fan, Y., Wang H., Yan, J., 2020
- A class of circadian long non-coding RNAs mark enhancers modulating long-range circadian gene regulation., Fan, Z., Zhao, M., Joshi, P., Li, P., Zhang, Y., Guo, W., Xu, Y., Wang, H., Zhao, Z., 2017
- Long-range chromosome interactions mediated by cohesin shape circadian gene expression., Xu, Y., Guo, W., Li, P., Zhang, Y., Zhao, M., Fan, Z., Zhao, Z., Yan, J., 2016
- Integrative Analysis of Circadian Transcriptome and Metabolic Network Reveals the Role of de novo Purine Synthesis in Circadian Control of Cell Cycle., Li, Y., Li, G., Görling, B., Luy, B., Du, J., Yan, J., 2015
- Reconstruction of the Gene Regulatory Network Involved in the Sonic Hedgehog Pathway with a Potential Role in Early Development of the Mouse Brain., Liu, J., Wang, X., Li, J., Wang, H., Wei, G., Yan, J., 2014
- Cold-induced RNA-binding proteins regulate circadian gene expression by controlling alternative polyadenylation., Liu, Y., Hu, W., Murakawa, Y., Yin, J., Wang, G., Landthaler, M., Yan, J., 2013
- Analysis of a gene regulatory cascade mediating circadian rhythm in zebrafish., Li, Y., Li, G., Wang, H., Du, J., Yan, J., 2013
- Computational Analysis of Gene Regulations in Animal Sleep Deprivation., Wang, H., Liu, Y., Briesemann, M., Yan, J., 2010
- Shotgun proteomics analysis of hibernating arctic ground squirrels., Shao, C., Liu, Y., Ruan, H., Li, Y., Wang, H., Kohl, F., Goropashnaya, A.V., Fedorov, V.B., Zeng, R., Barnes, B.M., Yan, J., 2010
- Analysis of gene regulatory networks in the mammalian circadian rhythm., Yan, J., Wang, H., Liu, Y., Shao, C., 2008
