Professor | Jun Yan | Asia Growth Partners

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Name	Jun Yan
Contact Information	junyan@@ion.ac.cn
Language ability	Chinese, English
Province	Shanghai

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Name

Jun Yan

Contact Information

junyan@@ion.ac.cn

Language ability

Chinese, English

Province

Shanghai

University/Lab Affiliation and Title	Chinese Academy of Sciences
Faculty	institute of neuroscience Chinese academy of sciences
Academic Background & Achievements	1994-1998 Bachelor of Science: Fudan University, Shanghai 1998-2003 Doctor of Science: New York University, USA
Work Experience	2003-2006 - University of Alaska Fairbanks, USA - Postdoctoral Research 2006-2009 - Institute of Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences - Researcher, Research Group Leader 2009-2015 - Max Planck Society, Germany - Young Scientist Group Leader 2015-present - Institute of Neuroscience, Chinese Academy of Sciences - Researcher, Research Group Leader

University/Lab Affiliation and Title

Chinese Academy of Sciences

Faculty

institute of neuroscience Chinese academy of sciences

Academic Background & Achievements

1994-1998 Bachelor of Science: Fudan University, Shanghai
1998-2003 Doctor of Science: New York University, USA

Work Experience

2003-2006 - University of Alaska Fairbanks, USA - Postdoctoral Research
2006-2009 - Institute of Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences - Researcher, Research Group Leader
2009-2015 - Max Planck Society, Germany - Young Scientist Group Leader
2015-present - Institute of Neuroscience, Chinese Academy of Sciences - Researcher, Research Group Leader

Areas of Focus	Large-scale neural network analysis Gene regulatory network analysis
Publications	Single-neuron analysis of dendrites and axons reveals the network organization in mouse prefrontal cortex., Gao, L., Liu, S., Wang, Y., Wu, Q., Gou, L., Yan, J., 2023 Cholecystokinin neurons in mouse suprachiasmatic nucleus regulate the robustness of circadian clock., Xie, L., Xiong, Y., Ma, D., Shi, K., Chen, J., Yang, Q., Yan, J., 2023 Single-neuron projectome of mouse prefrontal cortex., Gao, L., Liu, S., Gou, L., Hu, Y., Liu, Y., Deng, L., Ma, D., Wang, H., Yang, Q., Chen, Z., Liu, D., Qiu, S., Wang, X., Wang, D., Wang, X., Ren, B., Liu, Q., Chen, T., Shi, X., Yao, H., Xu, C., Li, C., Sun, Y., Li, A., Luo, Q., Gong, H., Xu, N., Yan, J., 2022 The landscape of regulatory genes in brain-wide neuronal phenotypes of a vertebrate brain., Zhang, H., Wang, H., Shen, X., Jia, X., Yu, S., Qiu, X., Wang, Y., Du, J., Yan, J., He, J., 2021 Single-cell in vivo imaging of cellular circadian oscillators in zebrafish., Wang, H., Yang, Z., Li, X., Huang, D., Yu, S., He, J., Li, Y., Yan, J., 2020 Spatiotemporal single-cell analysis of gene expression in the mouse suprachiasmatic nucleus., Wen, S., Ma, D., Zhao, M., Xie, L., Wu, Q., Gou, L., Zhu, C., Fan, Y., Wang H., Yan, J., 2020 A class of circadian long non-coding RNAs mark enhancers modulating long-range circadian gene regulation., Fan, Z., Zhao, M., Joshi, P., Li, P., Zhang, Y., Guo, W., Xu, Y., Wang, H., Zhao, Z., 2017 Long-range chromosome interactions mediated by cohesin shape circadian gene expression., Xu, Y., Guo, W., Li, P., Zhang, Y., Zhao, M., Fan, Z., Zhao, Z., Yan, J., 2016 Integrative Analysis of Circadian Transcriptome and Metabolic Network Reveals the Role of de novo Purine Synthesis in Circadian Control of Cell Cycle., Li, Y., Li, G., Görling, B., Luy, B., Du, J., Yan, J., 2015 Reconstruction of the Gene Regulatory Network Involved in the Sonic Hedgehog Pathway with a Potential Role in Early Development of the Mouse Brain., Liu, J., Wang, X., Li, J., Wang, H., Wei, G., Yan, J., 2014 Cold-induced RNA-binding proteins regulate circadian gene expression by controlling alternative polyadenylation., Liu, Y., Hu, W., Murakawa, Y., Yin, J., Wang, G., Landthaler, M., Yan, J., 2013 Analysis of a gene regulatory cascade mediating circadian rhythm in zebrafish., Li, Y., Li, G., Wang, H., Du, J., Yan, J., 2013 Computational Analysis of Gene Regulations in Animal Sleep Deprivation., Wang, H., Liu, Y., Briesemann, M., Yan, J., 2010 Shotgun proteomics analysis of hibernating arctic ground squirrels., Shao, C., Liu, Y., Ruan, H., Li, Y., Wang, H., Kohl, F., Goropashnaya, A.V., Fedorov, V.B., Zeng, R., Barnes, B.M., Yan, J., 2010 Analysis of gene regulatory networks in the mammalian circadian rhythm., Yan, J., Wang, H., Liu, Y., Shao, C., 2008

Areas of Focus

Large-scale neural network analysis
Gene regulatory network analysis

Publications

Single-neuron analysis of dendrites and axons reveals the network organization in mouse prefrontal cortex., Gao, L., Liu, S., Wang, Y., Wu, Q., Gou, L., Yan, J., 2023
Cholecystokinin neurons in mouse suprachiasmatic nucleus regulate the robustness of circadian clock., Xie, L., Xiong, Y., Ma, D., Shi, K., Chen, J., Yang, Q., Yan, J., 2023
Single-neuron projectome of mouse prefrontal cortex., Gao, L., Liu, S., Gou, L., Hu, Y., Liu, Y., Deng, L., Ma, D., Wang, H., Yang, Q., Chen, Z., Liu, D., Qiu, S., Wang, X., Wang, D., Wang, X., Ren, B., Liu, Q., Chen, T., Shi, X., Yao, H., Xu, C., Li, C., Sun, Y., Li, A., Luo, Q., Gong, H., Xu, N., Yan, J., 2022
The landscape of regulatory genes in brain-wide neuronal phenotypes of a vertebrate brain., Zhang, H., Wang, H., Shen, X., Jia, X., Yu, S., Qiu, X., Wang, Y., Du, J., Yan, J., He, J., 2021
Single-cell in vivo imaging of cellular circadian oscillators in zebrafish., Wang, H., Yang, Z., Li, X., Huang, D., Yu, S., He, J., Li, Y., Yan, J., 2020
Spatiotemporal single-cell analysis of gene expression in the mouse suprachiasmatic nucleus., Wen, S., Ma, D., Zhao, M., Xie, L., Wu, Q., Gou, L., Zhu, C., Fan, Y., Wang H., Yan, J., 2020
A class of circadian long non-coding RNAs mark enhancers modulating long-range circadian gene regulation., Fan, Z., Zhao, M., Joshi, P., Li, P., Zhang, Y., Guo, W., Xu, Y., Wang, H., Zhao, Z., 2017
Long-range chromosome interactions mediated by cohesin shape circadian gene expression., Xu, Y., Guo, W., Li, P., Zhang, Y., Zhao, M., Fan, Z., Zhao, Z., Yan, J., 2016
Integrative Analysis of Circadian Transcriptome and Metabolic Network Reveals the Role of de novo Purine Synthesis in Circadian Control of Cell Cycle., Li, Y., Li, G., Görling, B., Luy, B., Du, J., Yan, J., 2015
Reconstruction of the Gene Regulatory Network Involved in the Sonic Hedgehog Pathway with a Potential Role in Early Development of the Mouse Brain., Liu, J., Wang, X., Li, J., Wang, H., Wei, G., Yan, J., 2014
Cold-induced RNA-binding proteins regulate circadian gene expression by controlling alternative polyadenylation., Liu, Y., Hu, W., Murakawa, Y., Yin, J., Wang, G., Landthaler, M., Yan, J., 2013
Analysis of a gene regulatory cascade mediating circadian rhythm in zebrafish., Li, Y., Li, G., Wang, H., Du, J., Yan, J., 2013
Computational Analysis of Gene Regulations in Animal Sleep Deprivation., Wang, H., Liu, Y., Briesemann, M., Yan, J., 2010
Shotgun proteomics analysis of hibernating arctic ground squirrels., Shao, C., Liu, Y., Ruan, H., Li, Y., Wang, H., Kohl, F., Goropashnaya, A.V., Fedorov, V.B., Zeng, R., Barnes, B.M., Yan, J., 2010
Analysis of gene regulatory networks in the mammalian circadian rhythm., Yan, J., Wang, H., Liu, Y., Shao, C., 2008

Neural Networks Gene Regulation Biological Networks Computational Biology Bioinformatics Neuroscience Brain Function Circadian Rhythms Systems Biology Artificial Intelligence

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