Professor | Dongyu Zhao | Asia Growth Partners

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Name	Dongyu Zhao
Contact Information	zhaodongyu@bjmu.edu.cn
Language ability	Chinese, English
Province	Beijing

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Name

Dongyu Zhao

Contact Information

zhaodongyu@bjmu.edu.cn

Language ability

Chinese, English

Province

Beijing

University/Lab Affiliation and Title	Peking University
Faculty	Basic Medical Sciences
Academic Background & Achievements	2013 - PhD: Beijing Institute of Genomics, Chinese Academy of Sciences National High-level Young Talents Program, Boya Young Scholar at Peking University
Work Experience	2021 - Present - Peking University, Principal Investigator Postdoctoral Research at Houston Methodist Research Institute, Cornell University, and Boston Children's Hospital, Harvard Medical School
Awards	Moran Foundation Academic Award 2021 - Second Prize in Basic Teaching Skills Competition, Peking University 2021 - Third Prize in Young Teaching Competition, Peking University (Medical) 2022 - Outstanding Teacher Award and Outstanding Paper Award, Peking University

University/Lab Affiliation and Title

Peking University

Faculty

Basic Medical Sciences

Academic Background & Achievements

2013 - PhD: Beijing Institute of Genomics, Chinese Academy of Sciences
National High-level Young Talents Program, Boya Young Scholar at Peking University

Work Experience

2021 - Present - Peking University, Principal Investigator
Postdoctoral Research at Houston Methodist Research Institute, Cornell University, and Boston Children's Hospital, Harvard Medical School

Awards

Moran Foundation Academic Award
2021 - Second Prize in Basic Teaching Skills Competition, Peking University
2021 - Third Prize in Young Teaching Competition, Peking University (Medical)
2022 - Outstanding Teacher Award and Outstanding Paper Award, Peking University

Areas of Focus	Development of precise disease gene identification methods and bioinformatics analysis tools Research on disease (mainly tumors, cardiovascular) genomic variations and transcriptional regulation using multi-omics data Development of analysis software based on third-generation nanopore sequencing data
Publications	MIF is a critical regulator of mononuclear phagocytic infiltration in hepatocellular carcinoma, Yunxi Liao, Chenyang Wu, Yang Li, Jinhua Wen, Dongyu Zhao, 2023 CHD6 Promotes Broad Nucleosome Eviction for Transcriptional Activation in Prostate Cancer Cells, Dongyu Zhao, Min Zhang, Shaodong Huang, Qi Liu, Sen Zhu, Yanqiang Li, Weihua Jiang, Daniel L. Kiss, Qi Cao, Lili Zhang, Kaifu Chen, 2022 Broad Genic Repression Domains Signify Enhanced Silencing of Oncogenes, Dongyu Zhao, Lili Zhang, Min Zhang, Bo Xia, Jie Lv, Xinlei Gao, Guangyu Wang, Qingshu Meng, Yang Yi, Sen Zhu, Alin S. Tomoiaga, John P. Cooke, Qi Cao, Kaifu Chen, 2020 Machine Learning uncovers cell identity regulator by histone code, Bo Xia, Dongyu Zhao, Guangyu Wang, Jie Lv, Alin S. Tomoiaga, Min Zhang, Yanqiang Li, Xin Wang, Shu Meng, John Cooke, Qi Cao, Lili Zhang, Kaifu Chen, 2020 BMI1 is directly regulated by androgen receptor to promote castration resistance in prostate cancer, Sen Zhu, Dongyu Zhao, Chao Li, Qiaqia Li, Weihua Jiang, Qipeng Liu, Rui Wang, Ladan Fazli, Yinan Li, Lili Zhang, Yang Yi, Qingshu Meng, Wanyi Wang, Xiongbing Zu, Wei Zhao, Tuo Deng, Jindan Yu, Xuesen Dong, Kaifu Chen, Qi Cao, 2019 MLL4 Is Required to Maintain Broad H3K4me3 Peaks and Super-Enhancers at Tumor Suppressor Genes, Shilpa S. Dhar, Dongyu Zhao, Tao Lin, Bingnan Gu, Khusboo Pal, Hunain Alam, Jie Lv, Vidya Gopalakrishnan, Wei Li, Ali Shilatifard, Roy V. Sillitoe, Kaifu Chen, Min Gyu Lee, 2018 BMI1 regulates androgen receptor in prostate cancer independently of the polycomb repressive complex 1, Sen Zhu, Dongyu Zhao, Lin Yan, Weihua Jiang, Jung-Sun Kim, Bingnan Gu, Qipeng Liu, Rui Wang, Bo Xia, Jonathan C Zhao, Gang Song, Wenyi Mi, Rong-Fu Wang, Xiaobing Shi, Hung-Ming Lam, Xuesen Dong, Jindan Yu, Kaifu Chen, Qi Cao, 2018 PGAP-X: Extension on pan-genome analysis pipeline, Yongbing Zhao, Chen Sun, Dongyu Zhao, Yadong Zhang, Yang You, Xinmiao Jia, Junhui Yang, Lingping Wang, Jinyue Wang, Haohuan Fu, Yu Kang, Fei Chen, Jun Yu, Jiayan Wu, Jingfa Xiao, 2018 WikiCell: A Unified Resource Platform for Human Transcriptomics Research, Dongyu Zhao, Jiayan Wu, Yuanyuan Zhou, Wei Gong, Jingfa Xiao, Jun Yu, 2012 PMirP: A pre-microRNA prediction method based on structure-sequence hybrid features, Dongyu Zhao, Yan Wang, Di Luo, Xiaohu Shi, Liupu Wang, Dong Xu, Chunguang Zhou, Jun Yu, Yanchun Liang, 2010

Areas of Focus

Development of precise disease gene identification methods and bioinformatics analysis tools
Research on disease (mainly tumors, cardiovascular) genomic variations and transcriptional regulation using multi-omics data
Development of analysis software based on third-generation nanopore sequencing data

Publications

MIF is a critical regulator of mononuclear phagocytic infiltration in hepatocellular carcinoma, Yunxi Liao, Chenyang Wu, Yang Li, Jinhua Wen, Dongyu Zhao, 2023
CHD6 Promotes Broad Nucleosome Eviction for Transcriptional Activation in Prostate Cancer Cells, Dongyu Zhao, Min Zhang, Shaodong Huang, Qi Liu, Sen Zhu, Yanqiang Li, Weihua Jiang, Daniel L. Kiss, Qi Cao, Lili Zhang, Kaifu Chen, 2022
Broad Genic Repression Domains Signify Enhanced Silencing of Oncogenes, Dongyu Zhao, Lili Zhang, Min Zhang, Bo Xia, Jie Lv, Xinlei Gao, Guangyu Wang, Qingshu Meng, Yang Yi, Sen Zhu, Alin S. Tomoiaga, John P. Cooke, Qi Cao, Kaifu Chen, 2020
Machine Learning uncovers cell identity regulator by histone code, Bo Xia, Dongyu Zhao, Guangyu Wang, Jie Lv, Alin S. Tomoiaga, Min Zhang, Yanqiang Li, Xin Wang, Shu Meng, John Cooke, Qi Cao, Lili Zhang, Kaifu Chen, 2020
BMI1 is directly regulated by androgen receptor to promote castration resistance in prostate cancer, Sen Zhu, Dongyu Zhao, Chao Li, Qiaqia Li, Weihua Jiang, Qipeng Liu, Rui Wang, Ladan Fazli, Yinan Li, Lili Zhang, Yang Yi, Qingshu Meng, Wanyi Wang, Xiongbing Zu, Wei Zhao, Tuo Deng, Jindan Yu, Xuesen Dong, Kaifu Chen, Qi Cao, 2019
MLL4 Is Required to Maintain Broad H3K4me3 Peaks and Super-Enhancers at Tumor Suppressor Genes, Shilpa S. Dhar, Dongyu Zhao, Tao Lin, Bingnan Gu, Khusboo Pal, Hunain Alam, Jie Lv, Vidya Gopalakrishnan, Wei Li, Ali Shilatifard, Roy V. Sillitoe, Kaifu Chen, Min Gyu Lee, 2018
BMI1 regulates androgen receptor in prostate cancer independently of the polycomb repressive complex 1, Sen Zhu, Dongyu Zhao, Lin Yan, Weihua Jiang, Jung-Sun Kim, Bingnan Gu, Qipeng Liu, Rui Wang, Bo Xia, Jonathan C Zhao, Gang Song, Wenyi Mi, Rong-Fu Wang, Xiaobing Shi, Hung-Ming Lam, Xuesen Dong, Jindan Yu, Kaifu Chen, Qi Cao, 2018
PGAP-X: Extension on pan-genome analysis pipeline, Yongbing Zhao, Chen Sun, Dongyu Zhao, Yadong Zhang, Yang You, Xinmiao Jia, Junhui Yang, Lingping Wang, Jinyue Wang, Haohuan Fu, Yu Kang, Fei Chen, Jun Yu, Jiayan Wu, Jingfa Xiao, 2018
WikiCell: A Unified Resource Platform for Human Transcriptomics Research, Dongyu Zhao, Jiayan Wu, Yuanyuan Zhou, Wei Gong, Jingfa Xiao, Jun Yu, 2012
PMirP: A pre-microRNA prediction method based on structure-sequence hybrid features, Dongyu Zhao, Yan Wang, Di Luo, Xiaohu Shi, Liupu Wang, Dong Xu, Chunguang Zhou, Jun Yu, Yanchun Liang, 2010

Gene Identification Bioinformatics Analysis Tools Multi-Omics Genomic Variations Transcriptional Regulation Tumors Cardiovascular Diseases Nanopore Sequencing Software Development

Qinghua Cui - Peking University

Hua-Jun Wu - Peking University

Xiaohui Cang - Zhejiang University

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