Professor | Cheng Li | Asia Growth Partners

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Name	Cheng Li
Contact Information	cheng_li@pku.edu.cn
Language ability	Chinese, English
Province	Beijing

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Name

Cheng Li

Contact Information

cheng_li@pku.edu.cn

Language ability

Chinese, English

Province

Beijing

University/Lab Affiliation and Title	Peking University
Faculty	Life Sciences
Academic Background & Achievements	1991-1995 Bachelor in Computer Science: Beijing Normal University 1997-2001 PhD in Statistics: University of California, Los Angeles (Supervisor: Wing H Wong) Published over 100 academic papers, h-index of 62
Work Experience	2001-2002 Postdoctoral Researcher - Harvard School of Public Health, Biostatistics Department (Supervisor: Wing H Wong) 2002-2008 Assistant Professor - Harvard School of Public Health & Dana-Farber Cancer Institute, Biostatistics Department 2008-2013 Associate Professor - Harvard School of Public Health & Dana-Farber Cancer Institute, Biostatistics Department 2013-present Researcher - Peking University, School of Life Sciences & PKU-Tsinghua Center for Life Sciences & Center for Statistical Science

University/Lab Affiliation and Title

Peking University

Faculty

Life Sciences

Academic Background & Achievements

1991-1995 Bachelor in Computer Science: Beijing Normal University
1997-2001 PhD in Statistics: University of California, Los Angeles (Supervisor: Wing H Wong)
Published over 100 academic papers, h-index of 62

Work Experience

2001-2002 Postdoctoral Researcher - Harvard School of Public Health, Biostatistics Department (Supervisor: Wing H Wong)
2002-2008 Assistant Professor - Harvard School of Public Health & Dana-Farber Cancer Institute, Biostatistics Department
2008-2013 Associate Professor - Harvard School of Public Health & Dana-Farber Cancer Institute, Biostatistics Department
2013-present Researcher - Peking University, School of Life Sciences & PKU-Tsinghua Center for Life Sciences & Center for Statistical Science

Areas of Focus	Development of genomic data analysis algorithms and software Application of 3D genomics experimental techniques in regenerative biology
Publications	3D Genome of macaque fetal brain reveals evolutionary innovations during primate corticogenesis, Luo X, Liu Y, Dang D, Hu T, Hou Y, Meng X, Zhang F, Li T, Wang C, Li M, Wu H, Shen Q, Hu Y, Zeng X, He X, Yan L, Zhang S, Li C, Su B, 2021 Establishment of intestinal organoid cultures modeling injury-associated epithelial regeneration, Qu M, Xiong L, Lyu Y, Zhang X, Shen J, Guan J, Chai P, Lin Z, Nie B, Li C, Xu J, Deng H, 2021 Senescence-activated enhancer landscape orchestrates the senescence-associated secretory phenotype in murine fibroblasts, Guan Y, Zhang C, Lyu G, Huang X, Zhang X, Zhuang T, Jia L, Zhang L, Zhang C, Li C, Tao W, 2020 tagHi-C Reveals 3D Chromatin Architecture Dynamics during Mouse Hematopoiesis, Zhang C, Xu Z, Yang S, Sun G, Jia L, Zheng Z, Gu Q, Tao W, Cheng T, Li C, Cheng H, 2020 Single-cell transcriptome profiling reveals neutrophil heterogeneity in homeostasis and infection, Xie X, Shi Q, Wu P, Zhang X, Kambara H, Su J, Yu H, Park SY, Guo R, Ren Q, Zhang S, Xu Y, Silberstein LE, Cheng T, Ma F, Li C, Luo HR, 2020 Single-Cell RNA-Seq Reveals Dynamic Early Embryonic-like Programs during Chemical Reprogramming, Zhao T, Fu Y, Zhu J, Liu Y, Zhang Q, Yi Z, Chen S, Jiao Z, Xu X, Xu J, Duo S, Bai Y, Tang C, Li C, Deng H, 2018 OCEAN-C: mapping hubs of open chromatin interactions across the genome reveals gene regulatory networks, Li T, Jia L, Cao Y, Chen Q, Li C, 2018 Cell-Cycle-Targeting MicroRNAs as Therapeutic Tools against Refractory Cancers, Hydbring P, Wang Y, Fassl A, Li X, Matia V, Otto T, Choi YJ, Sweeney KE, Suski JM, Yin H, Bogorad RL, Goel S, Yuzugullu H, Kauffman KJ, Yang J, Jin C, Li Y, Floris D, Swanson R, Ng K, Sicinska E, Anders L, Zhao JJ, Polyak K, Anderson DG, Li C, Sicinski P, 2017 3D genome of multiple myeloma reveals spatial genome disorganization associated with copy number variations, Wu P, Li T, Li R, Jia L, Zhu P, Liu Y, Chen Q, Tang D, Yu Y, Li C, 2017 Dynamic chromatin accessibility modeled by Markov process of randomly-moving molecules in the 3D genome, Wang Y, Fan C, Zheng Y, Li C, 2017

Areas of Focus

Development of genomic data analysis algorithms and software
Application of 3D genomics experimental techniques in regenerative biology

Publications

3D Genome of macaque fetal brain reveals evolutionary innovations during primate corticogenesis, Luo X, Liu Y, Dang D, Hu T, Hou Y, Meng X, Zhang F, Li T, Wang C, Li M, Wu H, Shen Q, Hu Y, Zeng X, He X, Yan L, Zhang S, Li C, Su B, 2021
Establishment of intestinal organoid cultures modeling injury-associated epithelial regeneration, Qu M, Xiong L, Lyu Y, Zhang X, Shen J, Guan J, Chai P, Lin Z, Nie B, Li C, Xu J, Deng H, 2021
Senescence-activated enhancer landscape orchestrates the senescence-associated secretory phenotype in murine fibroblasts, Guan Y, Zhang C, Lyu G, Huang X, Zhang X, Zhuang T, Jia L, Zhang L, Zhang C, Li C, Tao W, 2020
tagHi-C Reveals 3D Chromatin Architecture Dynamics during Mouse Hematopoiesis, Zhang C, Xu Z, Yang S, Sun G, Jia L, Zheng Z, Gu Q, Tao W, Cheng T, Li C, Cheng H, 2020
Single-cell transcriptome profiling reveals neutrophil heterogeneity in homeostasis and infection, Xie X, Shi Q, Wu P, Zhang X, Kambara H, Su J, Yu H, Park SY, Guo R, Ren Q, Zhang S, Xu Y, Silberstein LE, Cheng T, Ma F, Li C, Luo HR, 2020
Single-Cell RNA-Seq Reveals Dynamic Early Embryonic-like Programs during Chemical Reprogramming, Zhao T, Fu Y, Zhu J, Liu Y, Zhang Q, Yi Z, Chen S, Jiao Z, Xu X, Xu J, Duo S, Bai Y, Tang C, Li C, Deng H, 2018
OCEAN-C: mapping hubs of open chromatin interactions across the genome reveals gene regulatory networks, Li T, Jia L, Cao Y, Chen Q, Li C, 2018
Cell-Cycle-Targeting MicroRNAs as Therapeutic Tools against Refractory Cancers, Hydbring P, Wang Y, Fassl A, Li X, Matia V, Otto T, Choi YJ, Sweeney KE, Suski JM, Yin H, Bogorad RL, Goel S, Yuzugullu H, Kauffman KJ, Yang J, Jin C, Li Y, Floris D, Swanson R, Ng K, Sicinska E, Anders L, Zhao JJ, Polyak K, Anderson DG, Li C, Sicinski P, 2017
3D genome of multiple myeloma reveals spatial genome disorganization associated with copy number variations, Wu P, Li T, Li R, Jia L, Zhu P, Liu Y, Chen Q, Tang D, Yu Y, Li C, 2017
Dynamic chromatin accessibility modeled by Markov process of randomly-moving molecules in the 3D genome, Wang Y, Fan C, Zheng Y, Li C, 2017

Genomics Data Analysis Software Development 3D Genomics Experimental Techniques Regenerative Biology Biostatistics Genetic Research Algorithm Development Biomedical Applications

Wang Qing - Huazhong University of Science and Technology

Yong Zhang - Tongji University

Jing Li - Shanghai Jiao Tong University

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