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Ruixin Zhu
Life Science
Tongji University
Shanghai
Language: Chinese, English
Ai
Drug Design
Non-Alcoholic Fatty Liver
Inflammatory Bowel Disease
Drug Screening
Microbiome
Non-Invasive Diagnostics
Host-Microbe Interaction
Synthetic Biology
Data-Driven Research
Areas of Focus
- Artificial Intelligence and Drug Design
- Artificial Intelligence and Microbiome
- Data-Intensive Research Algorithms and Platform Development
Work Experience
- 2007-2008 - Shanghai Center for Bioinformation Technology, Researcher
- 2008-Present - School of Life Sciences and Technology, Tongji University, Professor
Academic Background & Achievements
- 2001 - Bachelor of Chemistry, Lanzhou University
- 2007 - PhD in Computational Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences
- Published the first undergraduate textbook on Computer-Aided Drug Design in China
Publications
- Enhanced microbiota profiling in patients with quiescent Crohn's disease through comparison with paired healthy first-degree relatives, Ruixin Zhu et al., 2024
- The search for authentic microbiome–disease relationships, Ruixin Zhu et al., 2024
- Identification and validation of microbial biomarkers from cross-cohort datasets using xMarkerFinder, Ruixin Zhu et al., 2024
- Integrative multi-omics deciphers the spatial characteristics of host-gut microbiota interactions in Crohn’s disease, Ruixin Zhu et al., 2023
- Targeting Keystone Species Helps Restore the Dysbiosis of Butyrate‐Producing Bacteria in Nonalcoholic Fatty Liver Disease, Ruixin Zhu et al., 2022
- Multi-kingdom microbiota analyses identify bacterial-fungal interactions and biomarkers of colorectal cancer across cohorts, Ruixin Zhu et al., 2022
- Identification of microbial markers across populations in early detection of colorectal cancer, Ruixin Zhu et al., 2021
- Phylogenetic analyses with systematic taxon sampling show that mitochondria branch within Alphaproteobacteria, Ruixin Zhu et al., 2020
- Suppressed hepatic bile acid signalling despite elevated production of primary and secondary bile acids in NAFLD, Ruixin Zhu et al., 2018
Awards
- 2022 - Included in 'Top 100 International Cooperation Papers of Tongji University 2021'
- 2019 - Outstanding Doctoral Dissertation Supervisor, Tongji University
- 2017 - Annual Outstanding Research Worker, School of Life Sciences and Technology, Tongji University
