Professor | Yuan Zhou | Asia Growth Partners

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Name	Yuan Zhou
Contact Information	zhouyuanbioinfo@hsc.pku.edu.cn
Language ability	Chinese, English
Province	Beijing

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Name

Yuan Zhou

Contact Information

zhouyuanbioinfo@hsc.pku.edu.cn

Language ability

Chinese, English

Province

Beijing

University/Lab Affiliation and Title	Peking University
Faculty	Basic Medical Sciences
Academic Background & Achievements	2006-2010 Bachelor of Science in Biological Sciences: Capital Normal University 2010-2015 PhD in Bioinformatics: China Agricultural University Developed multiple bioinformatics tools and established influential databases
Work Experience	2015-07 - 2017-09 Postdoctoral Researcher, Department of Medical Informatics, Peking University Health Science Center 2017-09 - Present Associate Researcher, Researcher, Department of Medical Bioinformatics, Peking University Health Science Center
Awards	2023-2025: National Natural Science Foundation of China Excellent Young Scientists Fund

University/Lab Affiliation and Title

Peking University

Faculty

Basic Medical Sciences

Academic Background & Achievements

2006-2010 Bachelor of Science in Biological Sciences: Capital Normal University
2010-2015 PhD in Bioinformatics: China Agricultural University
Developed multiple bioinformatics tools and established influential databases

Work Experience

2015-07 - 2017-09 Postdoctoral Researcher, Department of Medical Informatics, Peking University Health Science Center
2017-09 - Present Associate Researcher, Researcher, Department of Medical Bioinformatics, Peking University Health Science Center

Awards

2023-2025: National Natural Science Foundation of China Excellent Young Scientists Fund

Areas of Focus	RNA regulatory bioinformatics
Publications	SRAMP: prediction of mammalian N6-methyladenosine (m6A) sites based on sequence-derived features, Yuan Zhou, Pan Zeng, Yan-Hui Li, Ziding Zhang, Qinghua Cui, 2016 TransmiR v2.0: an updated transcription factor-microRNA regulation database, Zhan Tong, Qinghua Cui, Juan Wang, Yuan Zhou, 2019 HMDD v3.0: a database for experimentally supported human microRNA-disease associations, Zhou Huang, Jiangcheng Shi, Yuanxu Gao, Chunmei Cui, Shan Zhang, Jianwei Li, Yuan Zhou, Qinghua Cui, 2019 NAT10-mediated N4-acetylcytidine mRNA modification regulates self-renewal in human embryonic stem cells, Rucong Liu, Zibaguli Wubulikasimu, Runze Cai, Fanyi Meng, Qinghua Cui, Yuan Zhou, Yang Li, 2023 GE-Impute: graph embedding-based imputation for single-cell RNA-seq data, Xiaobin Wu, Yuan Zhou, 2022 AbAgIntPre: A deep learning method for predicting antibody-antigen interactions based on sequence information, Yan Huang, Ziding Zhang, Yuan Zhou, 2022 SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network, Yan Huang, Stefan Wuchty, Yuan Zhou, Ziding Zhang, 2023 Germline genomic patterns are associated with cancer risk, oncogenic pathways, and clinical outcomes, Xue Xu, Yuan Zhou, Xiaowen Feng, Xiong Li, Mohammad Asad, Derek Li, Bo Liao, Jianqiang Li, Qinghua Cui, Edwin Wang, 2020 Benchmark of computational methods for predicting microRNA-disease associations, Zhou Huang, Leibo Liu, Jiangcheng Shi, Qinghua Cui, Jianwei Li, Yuan Zhou, 2019 TAM 2.0: tool for microRNA set analysis, Jianwei Li, Xiaofen Han, Yanping Wan, Shan Zhang, Yingshu Zhao, Rui Fan, Qinghua Cui, Yuan Zhou, 2018

Areas of Focus

RNA regulatory bioinformatics

Publications

SRAMP: prediction of mammalian N6-methyladenosine (m6A) sites based on sequence-derived features, Yuan Zhou, Pan Zeng, Yan-Hui Li, Ziding Zhang, Qinghua Cui, 2016
TransmiR v2.0: an updated transcription factor-microRNA regulation database, Zhan Tong, Qinghua Cui, Juan Wang, Yuan Zhou, 2019
HMDD v3.0: a database for experimentally supported human microRNA-disease associations, Zhou Huang, Jiangcheng Shi, Yuanxu Gao, Chunmei Cui, Shan Zhang, Jianwei Li, Yuan Zhou, Qinghua Cui, 2019
NAT10-mediated N4-acetylcytidine mRNA modification regulates self-renewal in human embryonic stem cells, Rucong Liu, Zibaguli Wubulikasimu, Runze Cai, Fanyi Meng, Qinghua Cui, Yuan Zhou, Yang Li, 2023
GE-Impute: graph embedding-based imputation for single-cell RNA-seq data, Xiaobin Wu, Yuan Zhou, 2022
AbAgIntPre: A deep learning method for predicting antibody-antigen interactions based on sequence information, Yan Huang, Ziding Zhang, Yuan Zhou, 2022
SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network, Yan Huang, Stefan Wuchty, Yuan Zhou, Ziding Zhang, 2023
Germline genomic patterns are associated with cancer risk, oncogenic pathways, and clinical outcomes, Xue Xu, Yuan Zhou, Xiaowen Feng, Xiong Li, Mohammad Asad, Derek Li, Bo Liao, Jianqiang Li, Qinghua Cui, Edwin Wang, 2020
Benchmark of computational methods for predicting microRNA-disease associations, Zhou Huang, Leibo Liu, Jiangcheng Shi, Qinghua Cui, Jianwei Li, Yuan Zhou, 2019
TAM 2.0: tool for microRNA set analysis, Jianwei Li, Xiaofen Han, Yanping Wan, Shan Zhang, Yingshu Zhao, Rui Fan, Qinghua Cui, Yuan Zhou, 2018

Rna Bioinformatics Regulation Database Tool Development Mirna Biomedical Genomics Methylation Transcription

Qinghua Cui - Peking University

Hua-Jun Wu - Peking University

Chen Li - Zhejiang University

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