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Qin Xu
xuqin523@sjtu.edu.cn
English, Chinese
Shanghai

Academic Information

Shanghai Jiao Tong University
Life Sciences
  • 2001 Bachelor of Biology, Peking University
  • 2008 PhD in Biology, University of Tennessee
  • 2009 Master of Statistics, University of Tennessee
  • 2010-2012 Postdoctoral Research, University of Tennessee/Oak Ridge National Laboratory
  • 2013-present Associate Researcher, School of Life Sciences and Technology, Shanghai Jiao Tong University
  • 2018-present Distinguished Researcher, Institute of Material Science and Technology, Zhejiang University Taizhou Institute
  • 2019-present Researcher, Shanghai Jiao Tong University-Yale University Joint Center for Biostatistics and Data Science
  • 2017.10 Zhejiang Taizhou 'Top 500 Talents' Award

Research

Computational Structural Biology
Biophysics
Biostatistics
  • An Allosteric Regulation Mechanism of Arabidopsis Serine/Threonine Kinase 1 (SIK1) Through Phosphorylation, Junxi Mu, Jiali Zhou, Qingqiu Gong, Qin Xu, 2022
  • SPVec: A Word2vec-inspired feature representation method for Drug-Target Interaction Prediction, Yu-Fang Zhang, Xiangeng Wang, Aman Chandra Kaushik, Yanyi Chu, Xiaoqi Shan, Ming-Zhu Zhao, Qin Xu, Dong-Qing Wei, 2020
  • The disulfide bond between Cys22 and Cys27 in the protease domain modulate clotting activity of coagulation factor X, Fang Li, Changming Chen, Si-Ying Qu, Ming-Zhu Zhao, Xiaoling Xie, Xi Wu, Lei Li, Xuefeng Wang, Qiulan Ding, Qin Xu, Dong-Qing Wei, Wenman Wu, 2019
  • Theoretical Studies of Intracellular Concentration of Micro-organisms’ Metabolites, Hai-Feng Yang, Xiao-Nan Zhang, Yan Li, Yong-Hong Zhang, Qin Xu, Dong-Qing Wei, 2017
  • The dynamic binding of cholesterol to the multiple sites of C99: as revealed by coarse-grained and all-atom simulations, Cheng-Dong Li, Qin Xu, Ruo-Xu Gu, Jing Qu, Dong-Qing Wei, 2017
  • Passive Transmembrane Permeation Mechanisms of Monovalent Ions Explored by Molecular Dynamics Simulations, Hui-Yuan Zhang, Qin Xu, Yu-Kun Wang, Tang-Zhen Zhao, Dan Hu, Dong-Qing Wei, 2016
  • The Destabilization of Alzheimer's Aβ42 Protofibrils with a Novel Drug Candidate wgx-50 by Molecular Dynamics Simulations, Huai-Meng Fan, Ruo-Xu Gu, Yan-Jing Wang, Yun-Long Pi, Yong-Hong Zhang, Qin Xu, Dong-Qing Wei, 2015
  • Energy Triplets for Writing Epigenetic Marks: Insights from QM/MM Free-Energy Simulations of Protein Lysine Methyltransferases, Qin Xu, Yu-Zhuo Chu, Hao-Bo Guo, Jeremy C. Smith, Hong Guo, 2009
  • The Importance of Dynamics in Substrate-Assisted Catalysis and Specificity, Qin Xu, Haobo Guo, Alexander Wlodawer, Hong Guo, 2006
  • Origin of Tight Binding of a Near-Perfect Transition-State Analogue by Cytidine Deaminase: Implications for Enzyme Catalysis, Haobo Guo, Niny Rao, Qin Xu, Hong Guo, 2005
Keywords
Molecular Simulation Protein Complexes Catalytic Mechanisms Structure-Function Relationship Regulation Principles Computational Methods Data Analysis Molecular Dynamics Protein Interactions Statistical Modeling
Related Professors
Qin Xu - Shanghai Jiao Tong University
Area of Focus
Molecular Simulation | Protein Complexes | Catalytic Mechanisms | Structure-Function Relationships | Regulatory Principles | Molecular Motion | Water Molecules | Charged Ions | Phospholipids | Artificial Intelligence
Wang Tao - Shanghai Jiao Tong University
Area of Focus
Machine Learning | Statistics | Data Analysis | Microbiome | High-Dimensional | Bioinformatics | Computational Methods | Statistical Modeling | Data Science | Biostatistics
Yudong Cai - Shanghai University
Area of Focus
Cancer | Genomics | Data Analysis | Sequencing | Clinical Data | Bioinformatics Tools | Computational Methods | Research | Development | Innovation | Microbial | Covid-19 | Pathogens | Infectious Diseases | Public Health | Epidemiology | Protein Design | Computational Tools | Molecular Dynamics | Simulation | Structure Prediction | Bioengineering | Synthetic Biology | Machine Learning | Algorithms | Data Mining | Predictive Modeling | Neural Networks | Deep Learning | Bioinformatics | Proteomics | Systems Biology | Natural Computing | Computational Models | Bio-Inspired | Genetic Algorithms | Optimization | Artificial Intelligence
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