Professor | Chenfei Wang | Asia Growth Partners

	Upload Avatar (500 x 500)
Name	Chenfei Wang
Contact Information	08chenfeiwang@tongji.edu.cn
Language ability	English, Chinese
Province	Shanghai

Upload Avatar (500 x 500)

Name

Chenfei Wang

Contact Information

08chenfeiwang@tongji.edu.cn

Language ability

English, Chinese

Province

Shanghai

University/Lab Affiliation and Title	Tongji University
Faculty	Life Sciences
Academic Background & Achievements	2008-2012 Bachelor in Bioinformatics, Tongji University 2012-2017 PhD in Bioinformatics, Tongji University Postdoctoral research at Tongji University and Dana-Farber Cancer Institute, Harvard University (2017-2020)
Work Experience	2020-Present Professor, School of Life Sciences and Technology, Tongji University
Awards	Wu Rui Scholarship Boxin Plan Shanghai Science and Technology Star Tongji University Excellence Award

University/Lab Affiliation and Title

Tongji University

Faculty

Life Sciences

Academic Background & Achievements

2008-2012 Bachelor in Bioinformatics, Tongji University
2012-2017 PhD in Bioinformatics, Tongji University
Postdoctoral research at Tongji University and Dana-Farber Cancer Institute, Harvard University (2017-2020)

Work Experience

2020-Present Professor, School of Life Sciences and Technology, Tongji University

Awards

Wu Rui Scholarship
Boxin Plan
Shanghai Science and Technology Star
Tongji University Excellence Award

Areas of Focus	Development of bioinformatics methods for single-cell and spatial multi-omics Regulatory mechanisms of epigenetic and metabolic reprogramming in cell identity transitions Aging and immune disease related cell identity transitions modeling and intervention
Publications	Proteogenomic characterization of small cell lung cancer identifies biological insights and subtype-specific therapeutic strategies, Liu Q, Zhang J, Guo C, Wang M, Wang C, et al., Zhang P, 2024 Cancer Cells Resistance to IFN-γ via Enhanced Double-Strand Break Repair Pathway, Han T, Wang X, Shi S, Zhang W, Wang J, Wu Q, Li Z, Fu J, Zheng R, Zhang J, Tang Q, Zhang P, Wang C, 2023 SCREE: a comprehensive pipeline for single-cell multi-modal CRISPR screen data processing and analysis, Wei H, Han T, Li T, Wu Q, Wang C, 2023 SELINA: Single-cell Assignment using Multiple-Adversarial Domain Adaptation Network with Large-scale References, Ren P, Wang C, 2023 Tumor microenvironment remodeling after neoadjuvant immunotherapy in non-small cell lung cancer revealed by single-cell RNA sequencing, Hu J, Zhang L, Xia H, Yan Y, Zhu X, Sun F, Sun L, Li S, Li D, Wang J, Han Y, Zhang J, Bian D, Yu H, Chen Y, Fan P, Ma Q, Jiang G, Wang C, Zhang P, 2023 Single-cell Dissection of Cervical Cancer Reveals Key Subsets of the Tumor Immune Microenvironment, Cao G, Yue J, Ruan Y, Han Y, Zhi Y, Lu J, Liu M, Xu X, Wang J, Gu Q, Wen X, Gao J, Kang J, Zhang Q, Wang C, Li F, 2023 TISCH2: expanded datasets and new tools for single-cell transcriptome analyses of the tumor microenvironment, Han Y, Wang Y, Dong X, Sun D, Liu Z, Yue J, Wang H, Li T, Wang C, 2023 HUSCH: an integrated single-cell transcriptome atlas for human tissue gene expression visualization and analyses, Shi X, Yu Z, Ren P, Dong X, Ding X, Song J, Zhang J, Li T, Wang C, 2023 Stage-specific H3K9me3 occupancy ensures retrotransposon silencing in human preimplantation embryos, Xu R, Li S, Wu Q, Li C, Jiang M, Guo L, Chen M, Yang L, Dong X, Wang H, Wang C, Liu X, Ou X, Gao S, 2022 STRIDE: accurately decomposing and integrating spatial transcriptomics using single-cell RNA sequencing, Sun D, Liu Z, Li T, Wu Q, Wang C, 2022 Single-cell Gene Regulation Network Inference by Large-scale Data Integration, Dong X, Tang K, Xu Y, Wei H, Han T, Wang C, 2022 Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information, Liu Z, Sun D, Wang C, 2022 Dynamic nucleosome organization after fertilization reveals regulatory factors for mouse zygotic genome activation, Wang C, Chen C, Liu X, Li C, Wu Q, Chen X, Yang L, Kou X, Zhao Y, Wang H, Gao Y, Zhang Y, Gao S, 2022 TISCH: a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment, Sun D, Wang J, Han Y, Dong X, Zheng R, Ge J, Shi X, Wang B, Li Z, Ren P, Sun L, Yan Y, Zhang P, Zhang F, Li T, Wang C, 2021 Integrative analyses of single-cell transcriptome and regulome using MAESTRO, Wang C, Sun D, Huang X, Wan C, Li Z, Han Y, Qin Q, Fan J, Qiu X, Xie Y, Meyer CA, Brown M, Tang M, Long H, Liu T, Liu XS, 2020 Reprogramming of H3K9me3-dependent heterochromatin during mammalian embryo development, Gao R, Wang C, Gao Y, Bai D, Liu X, Kou X, Zhao Y, Zang R, Liao Y, Jia Y, Chen J, Wang H, Wan X, Liu W, Zhang Y, Gao S, 2018 Inhibition of aberrant DNA re-methylation improves the development of nuclear transfer embryos, Liu X, Wang C, Liu W, Li J, Li C, Kou X, Chen J, Zhao Y, Gao H, Wang H, Zhang Y, Gao Y, Gao S, 2018 Distinct features of H3K4me3 and H3K27me3 chromatin domains in pre-implantation embryos, Liu X, Wang C, Liu W, Li J, Li C, Kou X, Chen J, Zhao Y, Gao H, Wang H, Zhang Y, Gao Y, Gao S, 2016 Identification of key factors conquering developmental arrest of somatic cell cloned embryos by combining embryo biopsy and single-cell sequencing, Liu W, Liu X, Wang C, Gao Y, Gao R, Kou X, Zhao Y, Li J, Wu Y, Xiu W, Wang S, Yin J, Liu W, Cai T, Wang H, Zhang Y, Gao S, 2016

Areas of Focus

Development of bioinformatics methods for single-cell and spatial multi-omics
Regulatory mechanisms of epigenetic and metabolic reprogramming in cell identity transitions
Aging and immune disease related cell identity transitions modeling and intervention

Publications

Proteogenomic characterization of small cell lung cancer identifies biological insights and subtype-specific therapeutic strategies, Liu Q, Zhang J, Guo C, Wang M, Wang C, et al., Zhang P, 2024
Cancer Cells Resistance to IFN-γ via Enhanced Double-Strand Break Repair Pathway, Han T, Wang X, Shi S, Zhang W, Wang J, Wu Q, Li Z, Fu J, Zheng R, Zhang J, Tang Q, Zhang P, Wang C, 2023
SCREE: a comprehensive pipeline for single-cell multi-modal CRISPR screen data processing and analysis, Wei H, Han T, Li T, Wu Q, Wang C, 2023
SELINA: Single-cell Assignment using Multiple-Adversarial Domain Adaptation Network with Large-scale References, Ren P, Wang C, 2023
Tumor microenvironment remodeling after neoadjuvant immunotherapy in non-small cell lung cancer revealed by single-cell RNA sequencing, Hu J, Zhang L, Xia H, Yan Y, Zhu X, Sun F, Sun L, Li S, Li D, Wang J, Han Y, Zhang J, Bian D, Yu H, Chen Y, Fan P, Ma Q, Jiang G, Wang C, Zhang P, 2023
Single-cell Dissection of Cervical Cancer Reveals Key Subsets of the Tumor Immune Microenvironment, Cao G, Yue J, Ruan Y, Han Y, Zhi Y, Lu J, Liu M, Xu X, Wang J, Gu Q, Wen X, Gao J, Kang J, Zhang Q, Wang C, Li F, 2023
TISCH2: expanded datasets and new tools for single-cell transcriptome analyses of the tumor microenvironment, Han Y, Wang Y, Dong X, Sun D, Liu Z, Yue J, Wang H, Li T, Wang C, 2023
HUSCH: an integrated single-cell transcriptome atlas for human tissue gene expression visualization and analyses, Shi X, Yu Z, Ren P, Dong X, Ding X, Song J, Zhang J, Li T, Wang C, 2023
Stage-specific H3K9me3 occupancy ensures retrotransposon silencing in human preimplantation embryos, Xu R, Li S, Wu Q, Li C, Jiang M, Guo L, Chen M, Yang L, Dong X, Wang H, Wang C, Liu X, Ou X, Gao S, 2022
STRIDE: accurately decomposing and integrating spatial transcriptomics using single-cell RNA sequencing, Sun D, Liu Z, Li T, Wu Q, Wang C, 2022
Single-cell Gene Regulation Network Inference by Large-scale Data Integration, Dong X, Tang K, Xu Y, Wei H, Han T, Wang C, 2022
Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information, Liu Z, Sun D, Wang C, 2022
Dynamic nucleosome organization after fertilization reveals regulatory factors for mouse zygotic genome activation, Wang C, Chen C, Liu X, Li C, Wu Q, Chen X, Yang L, Kou X, Zhao Y, Wang H, Gao Y, Zhang Y, Gao S, 2022
TISCH: a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment, Sun D, Wang J, Han Y, Dong X, Zheng R, Ge J, Shi X, Wang B, Li Z, Ren P, Sun L, Yan Y, Zhang P, Zhang F, Li T, Wang C, 2021
Integrative analyses of single-cell transcriptome and regulome using MAESTRO, Wang C, Sun D, Huang X, Wan C, Li Z, Han Y, Qin Q, Fan J, Qiu X, Xie Y, Meyer CA, Brown M, Tang M, Long H, Liu T, Liu XS, 2020
Reprogramming of H3K9me3-dependent heterochromatin during mammalian embryo development, Gao R, Wang C, Gao Y, Bai D, Liu X, Kou X, Zhao Y, Zang R, Liao Y, Jia Y, Chen J, Wang H, Wan X, Liu W, Zhang Y, Gao S, 2018
Inhibition of aberrant DNA re-methylation improves the development of nuclear transfer embryos, Liu X, Wang C, Liu W, Li J, Li C, Kou X, Chen J, Zhao Y, Gao H, Wang H, Zhang Y, Gao Y, Gao S, 2018
Distinct features of H3K4me3 and H3K27me3 chromatin domains in pre-implantation embryos, Liu X, Wang C, Liu W, Li J, Li C, Kou X, Chen J, Zhao Y, Gao H, Wang H, Zhang Y, Gao Y, Gao S, 2016
Identification of key factors conquering developmental arrest of somatic cell cloned embryos by combining embryo biopsy and single-cell sequencing, Liu W, Liu X, Wang C, Gao Y, Gao R, Kou X, Zhao Y, Li J, Wu Y, Xiu W, Wang S, Yin J, Liu W, Cai T, Wang H, Zhang Y, Gao S, 2016

Bioinformatics Single-Cell Multi-Omics Spatial Genomics Epigenetics Metabolic Cell Identity Aging Immune Disease Intervention

Yujun Hou - Tongji University

Fanglin Sun - Tongji University

Shi Jiejun - Tongji University

View All

Personal Information

Academic Information

Research

Contact us

No account yet?

Personal Information

Academic Information

Research

Contact us