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Weidong Tian
Life Science
Fudan University
Shanghai
Language: Chinese, English
Bioinformatics
Disease Coding Variants
Non-Coding Regulatory Sequences
Clinical Phenotype Data
Algorithm Development
Single-Cell Data
Rna Editing
Gene Transcription Regulation
Biological Pathways
Biological Networks
Areas of Focus
- Bioinformatics method development and application
- Screening of disease coding variants and non-coding regulatory sequence variants
- Algorithm development and application for clinical phenotype data analysis
- Single-cell data analysis methods and clinical applications
- RNA editing and gene transcription regulation
- Development and application of biological pathway and network analysis methods
Work Experience
- 2008 - Present - Fudan University - Professor
- 2008 - Present - National Key Laboratory of Genetic Engineering, Fudan University - PI
- 2009 - Present - Children's Hospital of Fudan University - Part-time PI
- 2018 - Present - Qilu Children's Hospital of Shandong University - Part-time PI
Academic Background & Achievements
- 1995 - Bachelor's Degree: Shanghai Jiao Tong University
- 1998 - Master's Degree: Tsinghua University
- 2004 - Ph.D.: Washington University in St. Louis
- 2005-2008 - Postdoctoral Research: Harvard Medical School
- 2008 - Professor: Fudan University
- 2008 - PI: National Key Laboratory of Genetic Engineering, Fudan University
- 2009 - Part-time PI: Children's Hospital of Fudan University
- 2018 - Part-time PI: Qilu Children's Hospital of Shandong University
- Shanghai Pujiang Talent
- Shanghai Shuguang Scholar
Publications
- Unsupervised Inference of Developmental Directions for Single Cells Using VECTOR, Zhang, F., Li, X., Tian, W#., 2020
- A novel approach to remove the batch effect of single-cell data, Zhang, F., Wu, Y., Tian, W#., 2019
- PhenoPro: A novel toolkit for assisting in the diagnosis of Mendelian diseases, Li, Z*., Zhang, F*., Wang, Y., Qiu, Y., Wu, Y., Lu, Y., Yang, L., Qu, W.J., Wang, H., Zhou, W.#, and Tian W#., 2019
- SPRINT: an SNP-free toolkit for identifying RNA editing sites, Zhang, F., Lu, Y., Yan, S., Xing, Q., Tian W#., 2017
- Explaining the disease phenotype of intergenic SNP through predicted long range regulation, Chen, J. and Tian, W.#, 2016
- Genome-Wide Identification of Regulatory Sequences Undergoing Accelerated Evolution in the Human Genome, Dong, X., Wang, X., Zhang, F. and Tian, W#., 2016
- GoFDR: A sequence alignment based method for predicting protein functions, Gong, Q., Ning, W. and Tian, W#., 2016
- GSA-Lightning: ultra-fast permutation-based gene set analysis, Chang, B.H. and Tian, W.#, 2016
- 《生物信息学与功能基因组学》, 田卫东，赵兴明, 2020
Awards
- Shanghai Pujiang Talent
- Shanghai Shuguang Scholar
