Professor | 田卫东 | 数字化转型顾问

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Name

田卫东

Contact Information

weidong.tian@fudan.edu.cn

Language ability

中文, 英语

Province

上海

University/Lab Affiliation and Title	复旦大学
Faculty	Life Sciences
Academic Background & Achievements	1995 - 学士学位: 上海交通大学 1998 - 硕士学位: 清华大学 2004 - 博士学位: 美国华盛顿大学（圣路易斯） 2005-2008 - 博士后研究: 美国哈佛大学医学院 2008 - 教授: 复旦大学 2008 - PI: 复旦大学遗传工程国家重点实验室 2009 - 兼职PI: 复旦大学附属儿科医院 2018 - 兼职PI: 山东大学齐鲁儿童医院上海浦江人才上海曙光学者
Work Experience	2008 - 现在 - 复旦大学 - 教授 2008 - 现在 - 复旦大学遗传工程国家重点实验室 - PI 2009 - 现在 - 复旦大学附属儿科医院 - 兼职PI 2018 - 现在 - 山东大学齐鲁儿童医院 - 兼职PI
Awards	上海浦江人才上海曙光学者

University/Lab Affiliation and Title

复旦大学

Faculty

Life Sciences

Academic Background & Achievements

Work Experience

Awards

Areas of Focus	生物信息学方法开发和应用疾病编码变异和非编码调控序列变异的筛选临床表型数据分析的算法开发和应用单细胞数据的分析方法开发和临床应用 RNA编辑和基因转录调控生物通路和生物网络的分析方法开发和应用
Publications	Unsupervised Inference of Developmental Directions for Single Cells Using VECTOR, Zhang, F., Li, X., Tian, W#., 2020 A novel approach to remove the batch effect of single-cell data, Zhang, F., Wu, Y., Tian, W#., 2019 PhenoPro: A novel toolkit for assisting in the diagnosis of Mendelian diseases, Li, Z., Zhang, F., Wang, Y., Qiu, Y., Wu, Y., Lu, Y., Yang, L., Qu, W.J., Wang, H., Zhou, W.#, and Tian W#., 2019 SPRINT: an SNP-free toolkit for identifying RNA editing sites, Zhang, F., Lu, Y., Yan, S., Xing, Q., Tian W#., 2017 Explaining the disease phenotype of intergenic SNP through predicted long range regulation, Chen, J. and Tian, W.#, 2016 Genome-Wide Identification of Regulatory Sequences Undergoing Accelerated Evolution in the Human Genome, Dong, X., Wang, X., Zhang, F. and Tian, W#., 2016 GoFDR: A sequence alignment based method for predicting protein functions, Gong, Q., Ning, W. and Tian, W#., 2016 GSA-Lightning: ultra-fast permutation-based gene set analysis, Chang, B.H. and Tian, W.#, 2016 《生物信息学与功能基因组学》, 田卫东，赵兴明, 2020

Areas of Focus

生物信息学方法开发和应用
疾病编码变异和非编码调控序列变异的筛选
临床表型数据分析的算法开发和应用
单细胞数据的分析方法开发和临床应用
RNA编辑和基因转录调控
生物通路和生物网络的分析方法开发和应用

Publications

Unsupervised Inference of Developmental Directions for Single Cells Using VECTOR, Zhang, F., Li, X., Tian, W#., 2020
A novel approach to remove the batch effect of single-cell data, Zhang, F., Wu, Y., Tian, W#., 2019
PhenoPro: A novel toolkit for assisting in the diagnosis of Mendelian diseases, Li, Z*., Zhang, F*., Wang, Y., Qiu, Y., Wu, Y., Lu, Y., Yang, L., Qu, W.J., Wang, H., Zhou, W.#, and Tian W#., 2019
SPRINT: an SNP-free toolkit for identifying RNA editing sites, Zhang, F., Lu, Y., Yan, S., Xing, Q., Tian W#., 2017
Explaining the disease phenotype of intergenic SNP through predicted long range regulation, Chen, J. and Tian, W.#, 2016
Genome-Wide Identification of Regulatory Sequences Undergoing Accelerated Evolution in the Human Genome, Dong, X., Wang, X., Zhang, F. and Tian, W#., 2016
GoFDR: A sequence alignment based method for predicting protein functions, Gong, Q., Ning, W. and Tian, W#., 2016
GSA-Lightning: ultra-fast permutation-based gene set analysis, Chang, B.H. and Tian, W.#, 2016
《生物信息学与功能基因组学》, 田卫东，赵兴明, 2020

生物信息学疾病编码变异非编码调控序列临床表型数据算法开发单细胞数据 Rna编辑基因转录调控生物通路生物网络

郝丽丽 - 中国科学院大学

郝沛 - 中国科学院大学

吴东东 - 中国科学院大学

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