Professor | 何顺民 | 数字化转型顾问

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Name	何顺民
Contact Information	heshunmin@ibp.ac
Language ability	中文, 英语
Province	北京

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Name

何顺民

Contact Information

heshunmin@ibp.ac

Language ability

中文, 英语

Province

北京

University/Lab Affiliation and Title	中国科学院大学
Faculty	Life Sciences
Academic Background & Achievements	2010-2011：哈佛大学博士后 2004-2009：中国科学院生物物理研究所生物信息学博士 1997-2001：南京理工大学电子工程专业学士
Work Experience	2017/05 - 至今：中国科学院生物物理研究所研究员；健康大数据研究中心常务副主任；中国科学院大学生命科学学院教授 2009-2017：中国科学院动物研究所副研究员 2016/04-2016/07：美国加州大学圣地亚哥分校访问学者 2001-2004：北京NEC电子有限公司软件工程师

University/Lab Affiliation and Title

中国科学院大学

Faculty

Life Sciences

Academic Background & Achievements

2010-2011：哈佛大学博士后
2004-2009：中国科学院生物物理研究所生物信息学博士
1997-2001：南京理工大学电子工程专业学士

Work Experience

2017/05 - 至今：中国科学院生物物理研究所研究员；健康大数据研究中心常务副主任；中国科学院大学生命科学学院教授
2009-2017：中国科学院动物研究所副研究员
2016/04-2016/07：美国加州大学圣地亚哥分校访问学者
2001-2004：北京NEC电子有限公司软件工程师

Areas of Focus	全基因组和多组学研究非编码基因研究疾病相关的单细胞和多组学研究
Publications	Adaptive Selection of Cis-regulatory Elements in the Han Chinese, Shuai Liu, Huaxia Luo, Peng Zhang, Yanyan Li, Di Hao, Sijia Zhang, Tingrui Song, Tao Xu, Shunmin He, 2024 Recent positive selection signatures reveal phenotypic evolution in the Han Chinese population, Huaxia Luo, Peng Zhang, Wanyu Zhang, Yu Zheng, Di Hao, Yirong Shi, Yiwei Niu, Tingrui Song, Yanyan Li, Shilei Zhao, Hua Chen, Tao Xu, Shunmin He, 2023 Noncoding RNA mutations in cancer, Honghong Zhou, Xinpei Hao, Peng Zhang, Shunmin He, 2023 Characterization of genome-wide STR variation in 6,487 human genomes, Yirong Shi, Yiwei Niu, Peng Zhang, Huaxia Luo, Shuai Liu, Sijia Zhang, Jiajia Wang, Yanyan Li, Xinyue Liu, Tingrui Song, Tao Xu, Shunmin He, 2023 NPInter v5.0: ncRNA interaction database in a new era, Yu Zheng, Huaxia Luo, Xueyi Teng, Xinpei Hao, Xiaoyu Yan, Yiheng Tang, Wanyu Zhang, Yuanxin Wang, Peng Zhang, Yanyan Li, Yi Zhao, Runsheng Chen, Shunmin He, 2023 Characterizing mobile element insertions in 5675 genomes, Yiwei Niu, Xueyi Teng, Honghong Zhou, Yirong Shi, Yanyan Li, Yiheng Tang, Peng Zhang, Huaxia Luo, Quan Kang, Tao Xu, Shunmin He, 2022 NyuWa Genome resource: A deep whole-genome sequencing-based variation profile and reference panel for the Chinese population, Peng Zhang, Huaxia Luo, Yanyan Li, You Wang, Jiajia Wang, Yu Zheng, Yiwei Niu, Yirong Shi, Honghong Zhou, Tingrui Song, Quan Kang, Han100K Initiative, Tao Xu, Shunmin He, 2021 piRBase: integrating piRNA annotation in all aspects, Jiajia Wang, Yirong Shi, Honghong Zhou, Peng Zhang, Tingrui Song, Zhiye Ying, Haopeng Yu, Yanyan Li, Yi Zhao, Xiaoxi Zeng, Shunmin He, Runsheng Chen, 2021 SmProt: A Reliable Repository with Comprehensive Annotation of Small Proteins Identified from Ribosome Profiling, Yanyan Li, Honghong Zhou, Xiaomin Chen, Yu Zheng, Quan Kang, Di Hao, Lili Zhang, Tingrui Song, Huaxia Luo, Yajing Hao, Runsheng Chen, Peng Zhang, Shunmin He, 2021 Global profiling of RNA-binding protein target sites by LACE-seq, Ruibao Su, Li-Hua Fan, Changchang Cao, Lei Wang, Zongchang Du, Zhaokui Cai, Ying-Chun Ouyang, Yue Wang, Qian Zhou, Ligang Wu, Nan Zhang, Xiaoxiao Zhu, Wen-Long Lei, Hailian Zhao, Yong Tian, Shunmin He, Catherine C L Wong, Qing-Yuan Sun, Yuanchao Xue, 2021 Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022, CNCB-NGDC Members and Partners, 2021 Active retrotransposons help maintain pericentromeric heterochromatin required for faithful cell division, Yajing Hao, Dongpeng Wang, Shuheng Wu, Xiao Li, Changwei Shao, Peng Zhang, Jia-Yu Chen, Do-Hwan Lim, Xiang-Dong Fu, Runsheng Chen, Shunmin He, 2020

Areas of Focus

全基因组和多组学研究
非编码基因研究
疾病相关的单细胞和多组学研究

Publications

Adaptive Selection of Cis-regulatory Elements in the Han Chinese, Shuai Liu, Huaxia Luo, Peng Zhang, Yanyan Li, Di Hao, Sijia Zhang, Tingrui Song, Tao Xu, Shunmin He, 2024
Recent positive selection signatures reveal phenotypic evolution in the Han Chinese population, Huaxia Luo, Peng Zhang, Wanyu Zhang, Yu Zheng, Di Hao, Yirong Shi, Yiwei Niu, Tingrui Song, Yanyan Li, Shilei Zhao, Hua Chen, Tao Xu, Shunmin He, 2023
Noncoding RNA mutations in cancer, Honghong Zhou, Xinpei Hao, Peng Zhang, Shunmin He, 2023
Characterization of genome-wide STR variation in 6,487 human genomes, Yirong Shi, Yiwei Niu, Peng Zhang, Huaxia Luo, Shuai Liu, Sijia Zhang, Jiajia Wang, Yanyan Li, Xinyue Liu, Tingrui Song, Tao Xu, Shunmin He, 2023
NPInter v5.0: ncRNA interaction database in a new era, Yu Zheng, Huaxia Luo, Xueyi Teng, Xinpei Hao, Xiaoyu Yan, Yiheng Tang, Wanyu Zhang, Yuanxin Wang, Peng Zhang, Yanyan Li, Yi Zhao, Runsheng Chen, Shunmin He, 2023
Characterizing mobile element insertions in 5675 genomes, Yiwei Niu, Xueyi Teng, Honghong Zhou, Yirong Shi, Yanyan Li, Yiheng Tang, Peng Zhang, Huaxia Luo, Quan Kang, Tao Xu, Shunmin He, 2022
NyuWa Genome resource: A deep whole-genome sequencing-based variation profile and reference panel for the Chinese population, Peng Zhang, Huaxia Luo, Yanyan Li, You Wang, Jiajia Wang, Yu Zheng, Yiwei Niu, Yirong Shi, Honghong Zhou, Tingrui Song, Quan Kang, Han100K Initiative, Tao Xu, Shunmin He, 2021
piRBase: integrating piRNA annotation in all aspects, Jiajia Wang, Yirong Shi, Honghong Zhou, Peng Zhang, Tingrui Song, Zhiye Ying, Haopeng Yu, Yanyan Li, Yi Zhao, Xiaoxi Zeng, Shunmin He, Runsheng Chen, 2021
SmProt: A Reliable Repository with Comprehensive Annotation of Small Proteins Identified from Ribosome Profiling, Yanyan Li, Honghong Zhou, Xiaomin Chen, Yu Zheng, Quan Kang, Di Hao, Lili Zhang, Tingrui Song, Huaxia Luo, Yajing Hao, Runsheng Chen, Peng Zhang, Shunmin He, 2021
Global profiling of RNA-binding protein target sites by LACE-seq, Ruibao Su, Li-Hua Fan, Changchang Cao, Lei Wang, Zongchang Du, Zhaokui Cai, Ying-Chun Ouyang, Yue Wang, Qian Zhou, Ligang Wu, Nan Zhang, Xiaoxiao Zhu, Wen-Long Lei, Hailian Zhao, Yong Tian, Shunmin He, Catherine C L Wong, Qing-Yuan Sun, Yuanchao Xue, 2021
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022, CNCB-NGDC Members and Partners, 2021
Active retrotransposons help maintain pericentromeric heterochromatin required for faithful cell division, Yajing Hao, Dongpeng Wang, Shuheng Wu, Xiao Li, Changwei Shao, Peng Zhang, Jia-Yu Chen, Do-Hwan Lim, Xiang-Dong Fu, Runsheng Chen, Shunmin He, 2020

基因组学多组学中国人群基因组测序遗传变异疾病关联精准医学非编码Rna 功能注释单细胞分析

刘琦 - 同济大学

刘琦 - 同济大学

Andrew Teschendorff - 中国科学院大学

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