Professor | 陈金锋 | 数字化转型顾问

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Name	陈金锋
Contact Information	chenjinfeng@ioz.ac.cn
Language ability	中文, 英语
Province	北京

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Name

陈金锋

Contact Information

chenjinfeng@ioz.ac.cn

Language ability

中文, 英语

Province

北京

University/Lab Affiliation and Title	中国科学院
Faculty	Institute of Zoology
Academic Background & Achievements	2004 - 学士学位: 西北农林科技大学 2006 - 生物化学与分子生物学硕士学位: 西北农林科技大学 2012 - 遗传学博士学位: 中国科学院遗传与发育生物学研究所
Work Experience	2013-2019 - 加州大学河滨分校 - 博士后研究 2017-2019 - 加州大学河滨分校 - 助理项目科学家 2019-2020 - 希望之城国家医疗中心 - 职员科学家 2020-至今 - 中国科学院动物研究所 - 研究组组长

University/Lab Affiliation and Title

中国科学院

Faculty

Institute of Zoology

Academic Background & Achievements

2004 - 学士学位: 西北农林科技大学
2006 - 生物化学与分子生物学硕士学位: 西北农林科技大学
2012 - 遗传学博士学位: 中国科学院遗传与发育生物学研究所

Work Experience

2013-2019 - 加州大学河滨分校 - 博士后研究
2017-2019 - 加州大学河滨分校 - 助理项目科学家
2019-2020 - 希望之城国家医疗中心 - 职员科学家
2020-至今 - 中国科学院动物研究所 - 研究组组长

Areas of Focus	害虫与宿主互作基因组学基因组结构与进化可持续病虫害防控方法
Publications	Pangenome analysis reveals genomic variations associated with domestication traits in broomcorn millet., Chen J, Liu Y, Liu M, Guo W, Wang Y, He Q, Chen W, Liao Y, Zhang W, Gao Y, Dong K, Ren R, Yang T, Zhang L, Qi M, Li Z, Zhao M, Wang H, Wang J, Qiao Z, Li H, Jiang Y, Liu G, Song X, Deng Y, Li H, Yan F, Dong Y, Li Q, Li T, Yang W, Cui J, Wang H, Zhou Y, Zhang X, Jia G, Lu P, Zhi H, Tang S, Diao X., 2023 A graph-based genome and pangenome variation of the model plant Setaria., He Q, Tang S, Zhi H, Chen J, Zhang J, Liang H, Alam O, Li H, Zhang H, Xing L, Li X, Zhang W, Wang H, Shi J, Du H, Wu H, Wang L, Yang P, Xing L, Yan H, Song Z, Liu J, Wang H, Tian X, Qiao Z, Feng G, Guo R, Zhu W, Ren Y, Hao H, Li M, Zhang A, Guo E, Yan F, Li Q, Liu Y, Tian B, Zhao X, Jia R, Feng B, Zhang J, Wei J, Lai J, Jia G, Purugganan M, Diao X., 2023 Biased mutations and gene losses underlying diploidization of the tetraploid broomcorn millet genome., Sun Y, Liu Y, Shi J, Wang L, Liang C, Yang J, Chen J, Chen M., 2023 A lncRNA fine-tunes salicylic acid biosynthesis to balance plant immunity and growth., Liu N, Xu Z, Li Q, Cao Y, Yang D, Liu S, Wang X, Mi Y, Liu Y, Ding C, Liu Y, Li Y, Yuan Y, Gao G, Chen J, Qian W, Zhang X., 2022 SARS-CoV-2 RNAs are processed into 22-nt vsRNAs in Vero cells., Liu Y, Rao J, Mi Y, Chen L, Feng L, Li Q, Geng J, Yang X, Zhan X, Ren L, Chen J, Zhang X., 2022 Serial single-cell genomics reveals convergent subclonal evolution of resistance as patients with early-stage breast cancer progress on endocrine plus CDK4/6 therapy., Griffiths, J.I., Chen, J., Cosgrove, P.A., O’Dea, A., Sharma, P., Ma, C., Trivedi, M., Kalinsky, K., Wisinski, K.B., O’Regan, R., Makhoul, I., Spring, L.M., Bardia, A., Adler, F.R., Cohen, A.L., Chang, J.T., Khan, Q.J. & Bild, A.H., 2021 Genomic diversity generated by a transposable element burst in a rice recombinant inbred population., Chen J, Lu L, Robb SMC, Collin M, Okumoto Y, Stajich JE, Wessler SR., 2020 Tracking the origin of two genetic components associated with transposable element bursts in domesticated rice., Chen J, Lu L, Benjamin J, Diaz S, Hancock CN, Stajich JE, et al., 2019 Comparison of Oryza sativa and Oryza brachyantha Genomes Reveals Selection-Driven Gene Escape from the Centromeric Regions., Liao Y, Zhang X, Li B, Liu T, Chen J, Bai Z, Wang M, Shi J, Walling JG, Wing RA, Jiang J, Chen M., 2018 Assessing genome assembly quality using the LTR Assembly Index (LAI)., Ou S, Chen J, Jiang N., 2018 Tracking the genome-wide outcomes of a transposable element burst over decades of amplification., Lu L, Chen J, Robb SMC, Okumoto Y, Stajich JE, Wessler SR., 2017 Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution., Chen J, Huang Q, Gao D, Wang J, Lang Y, Liu T, et al., 2013 Comparative sequence analysis of MONOCULM1-orthologous regions in 14 Oryza genomes., Lu F, Ammiraju JS, Sanyal A, Zhang S, Song R, Chen J, et al., 2009

Areas of Focus

害虫与宿主互作基因组学
基因组结构与进化
可持续病虫害防控方法

Publications

Pangenome analysis reveals genomic variations associated with domestication traits in broomcorn millet., Chen J, Liu Y, Liu M, Guo W, Wang Y, He Q, Chen W, Liao Y, Zhang W, Gao Y, Dong K, Ren R, Yang T, Zhang L, Qi M, Li Z, Zhao M, Wang H, Wang J, Qiao Z, Li H, Jiang Y, Liu G, Song X, Deng Y, Li H, Yan F, Dong Y, Li Q, Li T, Yang W, Cui J, Wang H, Zhou Y, Zhang X, Jia G, Lu P, Zhi H, Tang S, Diao X., 2023
A graph-based genome and pangenome variation of the model plant Setaria., He Q, Tang S, Zhi H, Chen J, Zhang J, Liang H, Alam O, Li H, Zhang H, Xing L, Li X, Zhang W, Wang H, Shi J, Du H, Wu H, Wang L, Yang P, Xing L, Yan H, Song Z, Liu J, Wang H, Tian X, Qiao Z, Feng G, Guo R, Zhu W, Ren Y, Hao H, Li M, Zhang A, Guo E, Yan F, Li Q, Liu Y, Tian B, Zhao X, Jia R, Feng B, Zhang J, Wei J, Lai J, Jia G, Purugganan M, Diao X., 2023
Biased mutations and gene losses underlying diploidization of the tetraploid broomcorn millet genome., Sun Y, Liu Y, Shi J, Wang L, Liang C, Yang J, Chen J, Chen M., 2023
A lncRNA fine-tunes salicylic acid biosynthesis to balance plant immunity and growth., Liu N, Xu Z, Li Q, Cao Y, Yang D, Liu S, Wang X, Mi Y, Liu Y, Ding C, Liu Y, Li Y, Yuan Y, Gao G, Chen J, Qian W, Zhang X., 2022
SARS-CoV-2 RNAs are processed into 22-nt vsRNAs in Vero cells., Liu Y, Rao J, Mi Y, Chen L, Feng L, Li Q, Geng J, Yang X, Zhan X, Ren L, Chen J, Zhang X., 2022
Serial single-cell genomics reveals convergent subclonal evolution of resistance as patients with early-stage breast cancer progress on endocrine plus CDK4/6 therapy., Griffiths, J.I., Chen, J., Cosgrove, P.A., O’Dea, A., Sharma, P., Ma, C., Trivedi, M., Kalinsky, K., Wisinski, K.B., O’Regan, R., Makhoul, I., Spring, L.M., Bardia, A., Adler, F.R., Cohen, A.L., Chang, J.T., Khan, Q.J. & Bild, A.H., 2021
Genomic diversity generated by a transposable element burst in a rice recombinant inbred population., Chen J, Lu L, Robb SMC, Collin M, Okumoto Y, Stajich JE, Wessler SR., 2020
Tracking the origin of two genetic components associated with transposable element bursts in domesticated rice., Chen J, Lu L, Benjamin J, Diaz S, Hancock CN, Stajich JE, et al., 2019
Comparison of Oryza sativa and Oryza brachyantha Genomes Reveals Selection-Driven Gene Escape from the Centromeric Regions., Liao Y, Zhang X, Li B, Liu T, Chen J, Bai Z, Wang M, Shi J, Walling JG, Wing RA, Jiang J, Chen M., 2018
Assessing genome assembly quality using the LTR Assembly Index (LAI)., Ou S, Chen J, Jiang N., 2018
Tracking the genome-wide outcomes of a transposable element burst over decades of amplification., Lu L, Chen J, Robb SMC, Okumoto Y, Stajich JE, Wessler SR., 2017
Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution., Chen J, Huang Q, Gao D, Wang J, Lang Y, Liu T, et al., 2013
Comparative sequence analysis of MONOCULM1-orthologous regions in 14 Oryza genomes., Lu F, Ammiraju JS, Sanyal A, Zhang S, Song R, Chen J, et al., 2009

基因组学害虫宿主互作基因组结构进化可持续控制方法

李明 - 中国科学院

魏辅文 - 中国科学院

Area of Focus
基因组学 | 生物多样性 | 进化 | 熊猫 | 保护 | 生态学 | 遗传学 | 栖息地 | 物种 | 生物学

詹祥江 - 中国科学院

Area of Focus
鸟类 | 基因组学 | 进化 | 遗传学 | 极端环境 | 迁徙 | 适应 | 生物多样性 | 保护 | 生态学

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